WormBase Tree Display for Gene: WBGene00005672
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| WBGene00005672 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y45F10B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sru-9 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y45F10B.11 | ||||||||
| Molecular_name | Y45F10B.11 | ||||||||
| Y45F10B.11.1 | |||||||||
| CE38239 | |||||||||
| Other_name | CELE_Y45F10B.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | sru-9 | ||||||||
| DB_info | Database | AceView | gene | 4O351 | |||||
| WormQTL | gene | WBGene00005672 | |||||||
| WormFlux | gene | WBGene00005672 | |||||||
| NDB | locus_tag | CELE_Y45F10B.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005672|UniProtKB=Q9XXR7 | |||||||
| family | PTHR46045 | ||||||||
| NCBI | gene | 189920 | |||||||
| RefSeq | protein | NM_070219.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315904 | |||||||
| TrEMBL | UniProtAcc | Q9XXR7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXR7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sru | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog (120) | |||||||||
| Structured_description | Automated_description | Enriched in anal depressor muscle and intestinal muscle based on single-cell RNA-seq studies. Is affected by several genes including clk-1; bar-1; and mdt-15 based on tiling array; microarray; and RNA-seq studies. Is affected by adsorbable organic bromine compound based on microarray studies. Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Sru and 7TM GPCR, serpentine receptor class u (Sru). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45F10B.11 | |||||||
| Corresponding_CDS_history | Y45F10B.11:wp140 | ||||||||
| Corresponding_transcript | Y45F10B.11.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020592 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056580 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010984 | ||||||||
| Expr1160045 | |||||||||
| Expr2016722 | |||||||||
| Expr2034904 | |||||||||
| Drives_construct | WBCnstr00034804 | ||||||||
| Construct_product | WBCnstr00034804 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (16) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | IV | Position | 10.0967 | Error | 0.010785 | |||
| Positive | Positive_clone | Y45F10B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
