WormBase Tree Display for Gene: WBGene00005655
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WBGene00005655 | SMap | S_parent | Sequence | K11D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | srr-4 | Person_evidence | WBPerson522 | |||||
Sequence_name | K11D12.3 | ||||||||
Molecular_name | K11D12.3a | ||||||||
K11D12.3a.1 | |||||||||
CE30386 | |||||||||
K11D12.3b | |||||||||
CE41248 | |||||||||
K11D12.3b.1 | |||||||||
Other_name | CELE_K11D12.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | srr-4 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00005655 | |||||
WormFlux | gene | WBGene00005655 | |||||||
NDB | locus_tag | CELE_K11D12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005655|UniProtKB=H2KYR4 | |||||||
family | PTHR31930 | ||||||||
NCBI | gene | 187292 | |||||||
RefSeq | protein | NM_001129504.4 | |||||||
NM_071946.10 | |||||||||
TREEFAM | TREEFAM_ID | TF318504 | |||||||
TrEMBL | UniProtAcc | H2KYR4 | |||||||
O44618 | |||||||||
UniProt_GCRP | UniProtAcc | H2KYR4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srr | ||||||||
Allele (134) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00021838 | ||||||||
00032962 | |||||||||
Ortholog (28) | |||||||||
Paralog (9) | |||||||||
Structured_description | Automated_description | Involved in determination of adult lifespan. Predicted to be located in membrane. Expressed in head neurons; hypodermis; pharynx; phasmid neurons; and vulva. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K11D12.3a | |||||||
K11D12.3b | |||||||||
Corresponding_CDS_history | K11D12.3:wp177 | ||||||||
Corresponding_transcript | K11D12.3a.1 | ||||||||
K11D12.3b.1 | |||||||||
Other_sequence | CJC04006_1 | ||||||||
Associated_feature | WBsf646791 | ||||||||
WBsf718299 | |||||||||
WBsf999916 | |||||||||
WBsf999917 | |||||||||
WBsf1019579 | |||||||||
WBsf231720 | |||||||||
Experimental_info | RNAi_result | WBRNAi00050588 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017008 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034279 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr14127 | ||||||||
Expr1018364 | |||||||||
Expr1032524 | |||||||||
Expr1154295 | |||||||||
Expr2016614 | |||||||||
Expr2034805 | |||||||||
Drives_construct | WBCnstr00034817 | ||||||||
Construct_product | WBCnstr00034817 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (273) | |||||||||
Interaction | WBInteraction000152781 | ||||||||
WBInteraction000214709 | |||||||||
WBInteraction000218671 | |||||||||
WBInteraction000270241 | |||||||||
WBInteraction000285371 | |||||||||
WBInteraction000336541 | |||||||||
WBInteraction000407648 | |||||||||
WBInteraction000447003 | |||||||||
WBInteraction000553062 | |||||||||
WBInteraction000580416 | |||||||||
Map_info | Map | V | Position | -3.59095 | Error | 0.001494 | |||
Positive | Positive_clone | K11D12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00048383 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |