WormBase Tree Display for Gene: WBGene00005582

WBGene00005582 Evidence: Person_evidence: WBPerson522
  SMap: S_parent: Sequence: Y61B8B
  Identity: Version: 1
    Name: CGC_name: sri-70 Person_evidence: WBPerson522
      Sequence_name: Y61B8B.1
      Molecular_name: Y61B8B.1
        Y61B8B.1.1
        CE41288
      Other_name: CELE_Y61B8B.1 Accession_evidence: NDB BX284605
      Public_name: sri-70
    DB_info: Database: AceView gene 5R783
        WormQTL gene WBGene00005582
        WormFlux gene WBGene00005582
        NDB locus_tag CELE_Y61B8B.1
        Panther gene CAEEL|WormBase=WBGene00005582|UniProtKB=O45967
          family PTHR45830
        NCBI gene 190450
        RefSeq protein NM_074979.3
        TREEFAM TREEFAM_ID TF315276
        TrEMBL UniProtAcc O45967
        UniProt_GCRP UniProtAcc O45967
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sri
    Allele: WBVar02122255
      WBVar01499524
      WBVar01499525
      WBVar01500098
      WBVar02124497
      WBVar01086021
      WBVar01086022
      WBVar01086023
      WBVar01086024
      WBVar01086025
      WBVar01086026
      WBVar01086027
      WBVar01086028
      WBVar01086029
      WBVar00483172
      WBVar02137986
      WBVar00483173
      WBVar00483174
      WBVar01499566
      WBVar00483175
      WBVar02122864
      WBVar01498290
      WBVar00091135
      WBVar02122328
      WBVar02122696
      WBVar01498682
      WBVar01636457
      WBVar02121796
      WBVar01499446
      WBVar01498710
      WBVar02123303
      WBVar02121652
      WBVar01498549
      WBVar02121298
      WBVar02124059
      WBVar01499299
      WBVar02124430
      WBVar02123142
      WBVar02124270
      WBVar01498957
      WBVar00091250
    RNASeq_FPKM (74)
    GO_annotation: 00035778
    Ortholog: WBGene00191911 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00083411 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00108536 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00140372 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP32.g10708 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP40.g14567 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      chrV_pilon.g17420 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00124687 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00125742 Caenorhabditis japonica From_analysis: WormBase-Compara
    Paralog (292)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y61B8B.1
    Corresponding_CDS_history: Y61B8B.1:wp98
      Y61B8B.1:wp177
    Corresponding_transcript: Y61B8B.1.1
    Other_sequence: FG647738.1
    Associated_feature: WBsf1002633
      WBsf1002634
      WBsf1021256
      WBsf233139
  Experimental_info: RNAi_result: WBRNAi00057836 Inferred_automatically: RNAi_primary
      WBRNAi00037667 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013338
      Expr1161273
      Expr2016569
      Expr2034762
    Drives_construct: WBCnstr00034869
    Construct_product: WBCnstr00034869
    Microarray_results: SMD_Y61B8B.1
      180803_at
      A_12_P116209
      Aff_Y61B8B.1
      GPL14144_Y61B8B.1_802-861_0.947_3_A
      GPL19516_CGZ0051490
      GPL21109_Y61B8B.1
      GPL8304_CE_WBGene00005582_A
      GPL8304_CE_WBGene00005582_B
      GPL8673_Y61B8B_1P00273
      GPL8673_Y61B8B_1P00548
      GPL8673_Y61B8B_1P00809
      cea2.d.46086
    Expression_cluster (94)
    Interaction (47)
  Map_info: Map: V Position: 12.8539 Error: 0.00049
    Positive: Positive_clone: Y61B8B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene