WormBase Tree Display for Gene: WBGene00005487

WBGene00005487 SMap: S_parent: Sequence: T21D12
  Identity: Version: 1
    Name: CGC_name: srh-282 Person_evidence: WBPerson522
      Sequence_name: T21D12.5
      Molecular_name: T21D12.5
        T21D12.5.1
        CE48505
      Other_name: CELE_T21D12.5 Accession_evidence: NDB BX284604
      Public_name: srh-282
    DB_info: Database: AceView gene 4B24
        WormQTL gene WBGene00005487
        WormFlux gene WBGene00005487
        NDB locus_tag CELE_T21D12.5
        Panther gene CAEEL|WormBase=WBGene00005487|UniProtKB=O16782
          family PTHR22941
        NCBI gene 188692
        RefSeq protein NM_067493.4
        TrEMBL UniProtAcc O16782
        UniProt_GCRP UniProtAcc O16782
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srh
    Allele (17)
    RNASeq_FPKM (74)
    GO_annotation: 00028579
    Ortholog: WBGene00138738 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00063793 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00063738 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00086254 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00111586 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP29.g12131 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g24702 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7686 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01763.g22988 Caenorhabditis sinica From_analysis: WormBase-Compara
      chrIV_pilon.g9475 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (297)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T21D12.5
    Corresponding_CDS_history: T21D12.5:wp112
      T21D12.5:wp239
    Corresponding_transcript: T21D12.5.1
    Other_sequence: BM00754
      MJ05052
      PT02193
  Experimental_info: RNAi_result: WBRNAi00018976 Inferred_automatically: RNAi_primary
      WBRNAi00053733 Inferred_automatically: RNAi_primary
      WBRNAi00035762 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027669
      Expr1157284
      Expr2034671
    Drives_construct: WBCnstr00034937
    Construct_product: WBCnstr00034937
    Microarray_results (15)
    Expression_cluster (31)
    Interaction: WBInteraction000206178
      WBInteraction000243206
      WBInteraction000303334
      WBInteraction000327906
      WBInteraction000335356
      WBInteraction000337193
      WBInteraction000389471
      WBInteraction000431469
  Map_info: Map: IV Position: -26.6974
    Positive: Positive_clone: T21D12 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene