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WormBase Tree Display for Gene: WBGene00005268

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Name Class

WBGene00005268SMapS_parentSequenceT03F7
IdentityVersion1
NameCGC_namesrh-45Person_evidenceWBPerson522
Sequence_nameT03F7.2
Molecular_nameT03F7.2
T03F7.2.1
CE36008
Other_nameCELE_T03F7.2Accession_evidenceNDBBX284605
Public_namesrh-45
DB_infoDatabaseAceViewgene5L782
WormQTLgeneWBGene00005268
WormFluxgeneWBGene00005268
NDBlocus_tagCELE_T03F7.2
PanthergeneCAEEL|WormBase=WBGene00005268|UniProtKB=Q22113
familyPTHR22941
NCBIgene188024
RefSeqproteinNM_073471.2
TrEMBLUniProtAccQ22113
UniProt_GCRPUniProtAccQ22113
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:37WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrh
Allele (18)
RNASeq_FPKM (74)
GO_annotation00074222
OrthologWBGene00072321Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00041571Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WBGene00153375Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00110413Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00096720Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g1789Caenorhabditis bovisFrom_analysisWormBase-Compara
Cang_2012_03_13_00276.g8319Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold495.g2197Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_20649Caenorhabditis latensFrom_analysisWormBase-Compara
chrV_pilon.g15741Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (297)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST03F7.2
Corresponding_CDS_historyT03F7.2:wp113
Corresponding_transcriptT03F7.2.1
Experimental_infoRNAi_resultWBRNAi00018082Inferred_automaticallyRNAi_primary
WBRNAi00052296Inferred_automaticallyRNAi_primary
Expr_patternExpr1019165
Expr1155930
Expr2016494
Expr2034693
Drives_constructWBCnstr00035076
Construct_productWBCnstr00035076
Microarray_results (21)
Expression_cluster (30)
Interaction (43)
Map_infoMapVPosition3.06927Error0.001586
PositivePositive_cloneT03F7Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00003921
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene