WormBase Tree Display for Gene: WBGene00005243
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| WBGene00005243 | SMap | S_parent | Sequence | C50B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-18 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C50B6.5 | ||||||||
| Molecular_name | C50B6.5 | ||||||||
| C50B6.5.1 | |||||||||
| CE08874 | |||||||||
| Other_name | CELE_C50B6.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-18 | ||||||||
| DB_info | Database | AceView | gene | 5N799 | |||||
| WormQTL | gene | WBGene00005243 | |||||||
| WormFlux | gene | WBGene00005243 | |||||||
| NDB | locus_tag | CELE_C50B6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005243|UniProtKB=P91980 | |||||||
| family | PTHR46891 | ||||||||
| NCBI | gene | 183633 | |||||||
| RefSeq | protein | NM_073900.2 | |||||||
| TREEFAM | TREEFAM_ID | TF342964 | |||||||
| TrEMBL | UniProtAcc | P91980 | |||||||
| UniProt_GCRP | UniProtAcc | P91980 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00051696 | ||||||||
| Ortholog | WBGene00052759 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00028975 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CSP28.g21276 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g21508 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g5683 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g19808 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g16211 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in chemosensory neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50B6.5 | |||||||
| Corresponding_transcript | C50B6.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042853 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012178 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5543 | ||||||||
| Expr11770 | |||||||||
| Expr1027084 | |||||||||
| Expr1146832 | |||||||||
| Expr2016412 | |||||||||
| Expr2034623 | |||||||||
| Drives_construct | WBCnstr00004141 | ||||||||
| WBCnstr00035095 | |||||||||
| Construct_product | WBCnstr00035095 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (25) | |||||||||
| Interaction (75) | |||||||||
| Map_info | Map | V | Position | 5.13147 | Error | 0.001807 | |||
| Positive | Positive_clone | C50B6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
