WormBase Tree Display for Gene: WBGene00005233
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WBGene00005233 | SMap | S_parent | Sequence | K09D9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | srh-7 | Person_evidence | WBPerson522 | |||||
Sequence_name | K09D9.7 | ||||||||
Molecular_name | K09D9.7 | ||||||||
K09D9.7.1 | |||||||||
CE26377 | |||||||||
Other_name | CELE_K09D9.7 | Accession_evidence | NDB | BX284605 | |||||
Public_name | srh-7 | ||||||||
DB_info | Database | AceView | gene | 5E487 | |||||
WormQTL | gene | WBGene00005233 | |||||||
WormFlux | gene | WBGene00005233 | |||||||
NDB | locus_tag | CELE_K09D9.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005233|UniProtKB=Q9N5I6 | |||||||
family | PTHR47405 | ||||||||
NCBI | gene | 191843 | |||||||
RefSeq | protein | NM_071717.1 | |||||||
TREEFAM | TREEFAM_ID | TF342964 | |||||||
TrEMBL | UniProtAcc | Q9N5I6 | |||||||
UniProt_GCRP | UniProtAcc | Q9N5I6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srh | ||||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00095430 | ||||||||
Ortholog (14) | |||||||||
Paralog (297) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in head neurons; intestine; and pharynx. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K09D9.7 | |||||||
Corresponding_transcript | K09D9.7.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00050414 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016904 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr14063 | ||||||||
Expr1015502 | |||||||||
Expr1154120 | |||||||||
Drives_construct | WBCnstr00035102 | ||||||||
Construct_product | WBCnstr00035102 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (20) | |||||||||
SAGE_tag | SAGE:aagctcccaagacaaca | Strand | Antisense | ||||||
SAGE:gcaggcaaggtgctttg | Strand | Antisense | |||||||
SAGE:tgtagccttaacgttgt | Strand | Antisense | |||||||
Interaction | WBInteraction000343637 | ||||||||
WBInteraction000366666 | |||||||||
WBInteraction000408182 | |||||||||
WBInteraction000432086 | |||||||||
Map_info | Map | V | Position | -7.05723 | Error | 0.002619 | |||
Positive | Positive_clone | K09D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |