WormBase Tree Display for Gene: WBGene00005231
expand all nodes | collapse all nodes | view schema
| WBGene00005231 | SMap | S_parent | Sequence | K04F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-5 | Person_evidence | WBPerson522 | |||||
| Sequence_name | K04F1.16 | ||||||||
| Molecular_name | K04F1.16 | ||||||||
| K04F1.16.1 | |||||||||
| CE26374 | |||||||||
| Other_name | CELE_K04F1.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-5 | ||||||||
| DB_info | Database | AceView | gene | 5C157 | |||||
| WormQTL | gene | WBGene00005231 | |||||||
| WormFlux | gene | WBGene00005231 | |||||||
| NDB | locus_tag | CELE_K04F1.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005231|UniProtKB=Q9TXK5 | |||||||
| family | PTHR47405 | ||||||||
| NCBI | gene | 191842 | |||||||
| RefSeq | protein | NM_071081.1 | |||||||
| TREEFAM | TREEFAM_ID | TF342964 | |||||||
| TrEMBL | UniProtAcc | Q9TXK5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXK5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097097 | ||||||||
| Ortholog (17) | |||||||||
| Paralog (298) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in ADLL; ADLR; ASHL; and ASHR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K04F1.16 | |||||||
| Corresponding_transcript | K04F1.16.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00049910 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033949 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14062 | ||||||||
| Expr1023377 | |||||||||
| Expr1153616 | |||||||||
| Drives_construct | WBCnstr00035103 | ||||||||
| Construct_product | WBCnstr00035103 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (30) | |||||||||
| SAGE_tag | SAGE:gttactgtag | Strand | Antisense | ||||||
| SAGE:gttactgtagatgctgc | Strand | Antisense | |||||||
| SAGE:ctcgctggct | Strand | Antisense | |||||||
| SAGE:aaaaaacaat | Strand | Antisense | |||||||
| SAGE:taattaaact | Strand | Antisense | |||||||
| Map_info | Map | V | Position | -17.7959 | Error | 0.000908 | |||
| Positive | Positive_clone | K04F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
