WormBase Tree Display for Gene: WBGene00005185
expand all nodes | collapse all nodes | view schema
| WBGene00005185 | SMap | S_parent | Sequence | T09D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-28 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T09D3.2 | ||||||||
| Molecular_name | T09D3.2 | ||||||||
| T09D3.2.1 | |||||||||
| CE33311 | |||||||||
| Other_name | CELE_T09D3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-28 | ||||||||
| DB_info | Database | AceView | gene | 5F813 | |||||
| WormQTL | gene | WBGene00005185 | |||||||
| WormFlux | gene | WBGene00005185 | |||||||
| NDB | locus_tag | CELE_T09D3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005185|UniProtKB=Q23034 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 353464 | |||||||
| RefSeq | protein | NM_182427.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| TrEMBL | UniProtAcc | Q23034 | |||||||
| UniProt_GCRP | UniProtAcc | Q23034 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077071 | ||||||||
| 00077072 | |||||||||
| 00113646 | |||||||||
| 00113647 | |||||||||
| 00113648 | |||||||||
| Ortholog (27) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09D3.2 | |||||||
| Corresponding_CDS_history | T09D3.2:wp93 | ||||||||
| T09D3.2:wp240 | |||||||||
| Corresponding_transcript | T09D3.2.1 | ||||||||
| Associated_feature | WBsf999982 | ||||||||
| WBsf1019621 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018496 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1019749 | ||||||||
| Expr1156546 | |||||||||
| Expr2034551 | |||||||||
| Drives_construct | WBCnstr00035140 | ||||||||
| Construct_product | WBCnstr00035140 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster | WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | ||||||||
| WBPaper00045974:NSM_enriched_totalRNA_tiling | |||||||||
| WBPaper00053888:drh-3(rrr2)_downregulated | |||||||||
| WBPaper00058955:heatshock_upregulated_CE | |||||||||
| WBPaper00060014:set-2(zr2012)_upregulated | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| cgc4489_group_18 | |||||||||
| Interaction (252) | |||||||||
| Map_info | Map | V | Position | -2.19985 | Error | 0.003618 | |||
| Positive | Positive_clone | T09D3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
