WormBase Tree Display for Gene: WBGene00005179
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| WBGene00005179 | SMap | S_parent | Sequence | Y25C1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-22 | Person_evidence | WBPerson42 | |||||
| Sequence_name | Y25C1A.10 | ||||||||
| Molecular_name | Y25C1A.10 | ||||||||
| Y25C1A.10.1 | |||||||||
| CE33209 | |||||||||
| Other_name | Y25C1A.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y25C1A.10 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | srg-22 | ||||||||
| DB_info | Database | AceView | gene | 2D380 | |||||
| WormQTL | gene | WBGene00005179 | |||||||
| WormFlux | gene | WBGene00005179 | |||||||
| NDB | locus_tag | CELE_Y25C1A.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005179|UniProtKB=Q9TYL7 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 189539 | |||||||
| RefSeq | protein | NM_062042.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| TrEMBL | UniProtAcc | Q9TYL7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TYL7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097447 | ||||||||
| 00097448 | |||||||||
| 00113628 | |||||||||
| 00113629 | |||||||||
| 00113630 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y25C1A.10 | |||||||
| Corresponding_CDS_history | Y25C1A.10:wp93 | ||||||||
| Corresponding_transcript | Y25C1A.10.1 | ||||||||
| Associated_feature | WBsf987150 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00055730 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020135 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017964 | ||||||||
| Expr1159249 | |||||||||
| Expr2016321 | |||||||||
| Expr2034548 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (21) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | II | Position | -8.58646 | Error | 0.009004 | |||
| Positive | Positive_clone | Y25C1A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
