WormBase Tree Display for Gene: WBGene00005170
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| WBGene00005170 | SMap | S_parent | Sequence | T23F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-13 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T23F11.5 | ||||||||
| Molecular_name | T23F11.5 | ||||||||
| T23F11.5.1 | |||||||||
| CE02356 | |||||||||
| Other_name | CELE_T23F11.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | srg-13 | ||||||||
| DB_info | Database | AceView | gene | 3F763 | |||||
| WormQTL | gene | WBGene00005170 | |||||||
| WormFlux | gene | WBGene00005170 | |||||||
| NDB | locus_tag | CELE_T23F11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005170|UniProtKB=P46567 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 191839 | |||||||
| RefSeq | protein | NM_065552.3 | |||||||
| SwissProt | UniProtAcc | P46567 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| UniProt_GCRP | UniProtAcc | P46567 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (25) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. srg-13:GFP expressed in sensory neuron PHA. In possible operon, srg-10,11,13. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00002135 | ||||||||
| WBStrain00002265 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046478 | ||||||||
| 00046479 | |||||||||
| 00113607 | |||||||||
| 00113608 | |||||||||
| 00113609 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23F11.5 | |||||||
| Corresponding_transcript | T23F11.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019087 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053944 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005144 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1786 | ||||||||
| Chronogram1999 | |||||||||
| Expr304 | |||||||||
| Expr6748 | |||||||||
| Expr13885 | |||||||||
| Expr1010428 | |||||||||
| Expr1157489 | |||||||||
| Expr2016314 | |||||||||
| Expr2034541 | |||||||||
| Drives_construct | WBCnstr00002900 | ||||||||
| WBCnstr00004454 | |||||||||
| WBCnstr00011092 | |||||||||
| WBCnstr00035149 | |||||||||
| WBCnstr00040229 | |||||||||
| Construct_product | WBCnstr00011092 | ||||||||
| WBCnstr00035149 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (20) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | III | Position | -2.94794 | Error | 0.002089 | |||
| Positive | Positive_clone | T23F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005612 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00055440 | |||||||||
| WBPaper00064660 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
