WormBase Tree Display for Gene: WBGene00005162
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| WBGene00005162 | SMap | S_parent | Sequence | C18F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-4 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T12A2.12 | ||||||||
| Molecular_name | T12A2.12 | ||||||||
| T12A2.12.1 | |||||||||
| CE33181 | |||||||||
| Other_name | CELE_T12A2.12 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | srg-4 | ||||||||
| DB_info | Database | AceView | gene | 3H348 | |||||
| WormQTL | gene | WBGene00005162 | |||||||
| NDB | locus_tag | CELE_T12A2.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005162|UniProtKB=P54126 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 24104888 | |||||||
| RefSeq | protein | NM_001306703.3 | |||||||
| SwissProt | UniProtAcc | P54126 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| UniProt_GCRP | UniProtAcc | P54126 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (41) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. In possible operon, srg-1 to srg-9. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00033261 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00048169 | ||||||||
| 00048170 | |||||||||
| 00113583 | |||||||||
| 00113584 | |||||||||
| 00113585 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ASIL; ASIR; ASKL; ASKR; and PVT. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12A2.12 | |||||||
| Corresponding_CDS_history | T12A2.12:wp93 | ||||||||
| Corresponding_transcript | T12A2.12.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018615 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053149 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091043 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035489 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053148 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005319 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14047 | ||||||||
| Expr1013641 | |||||||||
| Expr1156748 | |||||||||
| Expr2016341 | |||||||||
| Expr2034567 | |||||||||
| Drives_construct | WBCnstr00035156 | ||||||||
| Construct_product | WBCnstr00035156 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (18) | |||||||||
| Interaction | WBInteraction000254037 | ||||||||
| Map_info | Map | III | Position | -1.40714 | Error | 6.8e-05 | |||
| Positive | Positive_clone | T12A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00015440 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
