WormBase Tree Display for Gene: WBGene00005080
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| WBGene00005080 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R05H5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | srd-2 | Person_evidence | WBPerson522 | |||||
| Sequence_name | R05H5.1 | ||||||||
| Molecular_name | R05H5.1 | ||||||||
| R05H5.1.1 | |||||||||
| CE43249 | |||||||||
| Other_name | CELE_R05H5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srd-2 | ||||||||
| DB_info | Database | AceView | gene | 2K474 | |||||
| WormQTL | gene | WBGene00005080 | |||||||
| WormFlux | gene | WBGene00005080 | |||||||
| NDB | locus_tag | CELE_R05H5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005080|UniProtKB=Q21767 | |||||||
| family | PTHR22945 | ||||||||
| NCBI | gene | 191795 | |||||||
| RefSeq | protein | NM_063795.2 | |||||||
| SwissProt | UniProtAcc | Q21767 | |||||||
| TREEFAM | TREEFAM_ID | TF316515 | |||||||
| UniProt_GCRP | UniProtAcc | Q21767 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srd | ||||||||
| Allele (41) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor.48% identity to linked gene srd-1. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00031541 | ||||||||
| WBStrain00035786 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072746 | ||||||||
| 00072747 | |||||||||
| 00072748 | |||||||||
| 00072749 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (68) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05H5.1 | |||||||
| Corresponding_CDS_history | R05H5.1:wp196 | ||||||||
| Corresponding_transcript | R05H5.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051342 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017477 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025723 | ||||||||
| Expr1155036 | |||||||||
| Expr2016232 | |||||||||
| Expr2034464 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (20) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | II | Position | 2.2144 | Error | 0.00802 | |||
| Positive | Positive_clone | R05H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4630 | |||||||
| 4697 | |||||||||
| 4698 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00011633 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00023001 | |||||||||
| WBPaper00032196 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
