WormBase Tree Display for Gene: WBGene00005069
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| WBGene00005069 | SMap | S_parent | Sequence | C27D6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srb-4 | Person_evidence | WBPerson42 | ||||||
| Sequence_name | C27D6.7 | |||||||||
| Molecular_name | C27D6.7 | |||||||||
| Other_name | CELE_C27D6.7 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | srb-4 | |||||||||
| DB_info | Database | AceView | gene | 2F452 | ||||||
| WormQTL | gene | WBGene00005069 | ||||||||
| NDB | locus_tag | CELE_C27D6.7 | ||||||||
| NCBI | gene | 13184877 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 28 Feb 2005 11:20:24 | WBPerson1867 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srb | |||||||||
| Allele (13) | ||||||||||
| Legacy_information | [C.elegansII] NMK. Probable pseudogene; may encode predicted serpentine receptor. srb-1 to srb-5 possible operon. [Troemel et al. 1995; CX] | |||||||||
| Strain | WBStrain00001970 | |||||||||
| WBStrain00002417 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00005067 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by hmg-4; let-418; and dcp-66 based on RNA-seq studies. Is affected by resveratrol and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C27D6.7:wp140 | ||||||||
| Corresponding_pseudogene | C27D6.7 | |||||||||
| Experimental_info | Expr_pattern | Chronogram1290 | ||||||||
| Expr5358 | ||||||||||
| Expr5359 | ||||||||||
| Drives_construct | WBCnstr00002755 | |||||||||
| WBCnstr00004405 | ||||||||||
| Microarray_results | SMD_C27D6.7 | |||||||||
| 184060_at | ||||||||||
| A_12_P110172 | ||||||||||
| Aff_C27D6.7 | ||||||||||
| GPL19516_CGZ0006263 | ||||||||||
| GPL21109_C27D6.7 | ||||||||||
| Expression_cluster | WBPaper00055013:hmg-4(RNAi)_downregulated | |||||||||
| WBPaper00061527:srj-42-srw-113 | ||||||||||
| WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated | ||||||||||
| cgc4489_group_12 | ||||||||||
| WBPaper00025141:N2_Expressed_Genes | ||||||||||
| WBPaper00025141:unc-4::GFP_Expressed_Genes | ||||||||||
| WBPaper00026929:Resveratrol_regulated_daf-16 | ||||||||||
| WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | ||||||||||
| Map_info | Map | II | Position | -1.96572 | Error | 0.002399 | ||||
| Positive | Positive_clone | C27D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00002314 | |||||||||
| WBPaper00015440 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
