WormBase Tree Display for Gene: WBGene00005036
expand all nodes | collapse all nodes | view schema
| WBGene00005036 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F44F4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-10 | Person_evidence | WBPerson42 | |||||
| Sequence_name | F44F4.5 | ||||||||
| Molecular_name | F44F4.5a | ||||||||
| F44F4.5a.1 | |||||||||
| CE01001 | |||||||||
| F44F4.5b | |||||||||
| CE35537 | |||||||||
| F44F4.5b.1 | |||||||||
| Other_name | CELE_F44F4.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-10 | ||||||||
| DB_info | Database | AceView | gene | 2L184 | |||||
| WormQTL | gene | WBGene00005036 | |||||||
| WormFlux | gene | WBGene00005036 | |||||||
| NDB | locus_tag | CELE_F44F4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005036|UniProtKB=Q20405 | |||||||
| family | PTHR31357 | ||||||||
| NCBI | gene | 191781 | |||||||
| RefSeq | protein | NM_001026991.4 | |||||||
| NM_001026992.3 | |||||||||
| SwissProt | UniProtAcc | Q20405 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q20405 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (34) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-10:GFP expressed in sensory neuron URX, interneuron ALA, additional interneurons,pharyngeal neurons, muscle. sra-10,11,12 clustered. [Troemel et al. 1995; CX] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (44) | |||||||||
| Paralog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. Expressed in dorsal ganglion; muscle cell; and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44F4.5a | |||||||
| F44F4.5b | |||||||||
| Corresponding_transcript | F44F4.5a.1 | ||||||||
| F44F4.5b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047324 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032262 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014956 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr294 | ||||||||
| Expr6074 | |||||||||
| Expr1019864 | |||||||||
| Expr1151175 | |||||||||
| Expr2016127 | |||||||||
| Expr2034362 | |||||||||
| Drives_construct | WBCnstr00003852 | ||||||||
| WBCnstr00011030 | |||||||||
| WBCnstr00035250 | |||||||||
| Construct_product | WBCnstr00011030 | ||||||||
| WBCnstr00035250 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (54) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | II | Position | 3.13149 | Error | 9e-05 | |||
| Positive | Positive_clone | F44F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005965 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00024667 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
