WormBase Tree Display for Gene: WBGene00005012
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WBGene00005012 | SMap | S_parent | Sequence | F26F4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F26F4.2 | |||||
Molecular_name | F26F4.2 | ||||||
F26F4.2.1 | |||||||
CE29288 | |||||||
Other_name | CELE_F26F4.2 | Accession_evidence | NDB | BX284603 | |||
Public_name | F26F4.2 | ||||||
DB_info | Database | AceView | gene | 3G1 | |||
WormQTL | gene | WBGene00005012 | |||||
WormFlux | gene | WBGene00005012 | |||||
NDB | locus_tag | CELE_F26F4.2 | |||||
NCBI | gene | 184988 | |||||
RefSeq | protein | NM_065631.5 | |||||
TREEFAM | TREEFAM_ID | TF318013 | |||||
TrEMBL | UniProtAcc | Q19823 | |||||
UniProt_GCRP | UniProtAcc | Q19823 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele | WBVar01999572 | ||||||
WBVar01566377 | |||||||
WBVar00824593 | |||||||
WBVar00824594 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (32) | |||||||
Paralog | WBGene00009501 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | F26F4.2 encodes a novel protein with high similarity to C. elegans F37A8.1 and C. briggsae CBG18186. | Curator_confirmed | WBPerson48 | |||
Date_last_updated | 17 Jul 2007 00:00:00 | ||||||
Automated_description | Enriched in RIC; germ line; intestine; sperm; and in male based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and rrf-3 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray; RNA-seq; and proteomic studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F26F4.2 | |||||
Corresponding_transcript | F26F4.2.1 | ||||||
Other_sequence | CJC05297_1 | ||||||
Associated_feature | WBsf224825 | ||||||
Experimental_info | RNAi_result | WBRNAi00045674 | Inferred_automatically | RNAi_primary | |||
WBRNAi00013962 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005116 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045671 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1019910 | ||||||
Expr1032496 | |||||||
Expr1149586 | |||||||
Expr2003035 | |||||||
Expr2021249 | |||||||
Drives_construct | WBCnstr00035268 | ||||||
Construct_product | WBCnstr00035268 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (137) | |||||||
Interaction (40) | |||||||
Map_info | Positive | Positive_clone | F26F4 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | |||||||
Interpolated_map_position | III | -2.38345 | |||||
Remark | This gene was previously incorrectly identified as spt-1 based on an unintended error in the CGC strain data files | Curator_confirmed | WBPerson1971 | ||||
Method | Gene |