WormBase Tree Display for Gene: WBGene00005003

WBGene00005003 Evidence: Author_evidence: Patthy L
      Hodgkin JA
  SMap: S_parent: Sequence: F27C8
  Identity: Version: 1
    Name: CGC_name: spp-18
      Sequence_name: F27C8.4
      Molecular_name: F27C8.4a
        F27C8.4a.1
        CE03269
        F27C8.4b
        CE49790
        F27C8.4b.1
      Other_name: CELE_F27C8.4 Accession_evidence: NDB BX284604
      Public_name: spp-18
    DB_info: Database: AceView gene 4K359
        WormQTL gene WBGene00005003
        WormFlux gene WBGene00005003
        NDB locus_tag CELE_F27C8.4
        NCBI gene 185015
        RefSeq protein NM_001307043.3
            NM_069303.6
        TrEMBL UniProtAcc A0A061AKY5
            Q19837
        UniProt_GCRP UniProtAcc Q19837
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spp
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation: 00066022
    Ortholog (22)
    Structured_description: Automated_description: Involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F27C8.4a
      F27C8.4b
    Corresponding_transcript: F27C8.4a.1
      F27C8.4b.1
    Other_sequence: CSC00706_1
      Acan_isotig15926
      FD517186.1
      CBC01973_1
      FD514900.1
      FD516627.1
      Oden_isotig24770
      CBC01973_2
      CJC02180_1
    Associated_feature: WBsf646242
      WBsf228846
      WBsf228847
  Experimental_info: RNAi_result: WBRNAi00092944 Inferred_automatically: RNAi_primary
      WBRNAi00045735 Inferred_automatically: RNAi_primary
      WBRNAi00075930 Inferred_automatically: RNAi_primary
      WBRNAi00013994 Inferred_automatically: RNAi_primary
      WBRNAi00031491 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013487
      Expr1032489
      Expr1149642
      Expr2016073
      Expr2034309
    Drives_construct: WBCnstr00035276
    Construct_product: WBCnstr00035276
    Microarray_results (18)
    Expression_cluster (292)
    Interaction: WBInteraction000111059
      WBInteraction000181032
      WBInteraction000188705
      WBInteraction000229770
      WBInteraction000237340
      WBInteraction000249021
      WBInteraction000251766
      WBInteraction000255506
      WBInteraction000256321
      WBInteraction000257451
      WBInteraction000275331
      WBInteraction000277349
      WBInteraction000282549
      WBInteraction000286302
      WBInteraction000290672
      WBInteraction000296373
      WBInteraction000298748
      WBInteraction000302663
      WBInteraction000311035
      WBInteraction000312060
      WBInteraction000342810
      WBInteraction000343736
      WBInteraction000348664
      WBInteraction000362041
      WBInteraction000363548
      WBInteraction000366905
      WBInteraction000373482
      WBInteraction000373817
      WBInteraction000376434
      WBInteraction000383641
      WBInteraction000384986
      WBInteraction000395198
      WBInteraction000395257
      WBInteraction000403878
      WBInteraction000405217
      WBInteraction000406017
      WBInteraction000407180
      WBInteraction000409790
      WBInteraction000416113
      WBInteraction000425340
      WBInteraction000431777
      WBInteraction000444342
      WBInteraction000448785
      WBInteraction000451349
      WBInteraction000454970
      WBInteraction000455813
      WBInteraction000458600
      WBInteraction000461252
  Map_info: Map: IV Position: 4.32629 Error: 0.001722
    Positive: Positive_clone: F27C8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006465
    WBPaper00024209
    WBPaper00027295
    WBPaper00028482
    WBPaper00061383
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene