WormBase Tree Display for Gene: WBGene00004964
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| WBGene00004964 | SMap | S_parent | Sequence | AC3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spe-10 | Paper_evidence | WBPaper00026789 | |||||
| Person_evidence | WBPerson252 | ||||||||
| Sequence_name | AC3.10 | ||||||||
| Molecular_name | AC3.10 | ||||||||
| AC3.10.1 | |||||||||
| CE37870 | |||||||||
| AC3.10.2 | |||||||||
| Other_name | CELE_AC3.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | spe-10 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 22 Dec 2005 10:42:16 | WBPerson2970 | Event | Acquires_merge | WBGene00044023 | ||||
| Acquires_merge | WBGene00044023 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (25) | |||||||||
| Legacy_information | hc104ts : hermaphrodites and males produce nonfunctional but motile sperm with short pseudopods. ES2 (adult). NA1. | ||||||||
| [C.elegansII] hc104ts : hermaphrodites and males produce nonfunctional but motile sperm with short pseudopods; severe defects in fibrous body-membranous organelle. ES2 (adult). NA1. [Shakes and Ward 1989b; BA; DS] | |||||||||
| Strain | WBStrain00000373 | ||||||||
| WBStrain00000374 | |||||||||
| WBStrain00000383 | |||||||||
| WBStrain00000386 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (36) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | spe-10 encodes a DHHC-CRD family zinc-finger transmembrane protein with homologs in other eukaryotes and is predicted to be a palmitoyl transferase; spe-10 is required during spermatogenesis and thus for fertility; specifically, spe-10 is required for the proper biogenesis and functioning of specialized Golgi-derived fibrous body-membranous organelle (FB-MO) complexes during spermatid formation; spe-10 localizes to the FB-MOs of spermatids. | Paper_evidence | WBPaper00001174 | |||||
| WBPaper00026789 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 13 Aug 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein-cysteine S-palmitoyltransferase activity. Involved in several processes, including amoeboid sperm motility; cellular component organization; and spermatid development. Located in membrane-bounded organelle. Expressed in spermatid. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AC3.10 | |||||||
| Corresponding_transcript | AC3.10.1 | ||||||||
| AC3.10.2 | |||||||||
| Other_sequence | Dviv_isotig23932 | ||||||||
| JO473984.1 | |||||||||
| JI175708.1 | |||||||||
| Oden_isotig12241 | |||||||||
| Oden_isotig12242 | |||||||||
| Oden_isotig12243 | |||||||||
| Tcol_isotig22537 | |||||||||
| Associated_feature | WBsf1001107 | ||||||||
| WBsf232375 | |||||||||
| Transcription_factor | WBTranscriptionFactor000799 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00069480 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038596 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103710 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3775 | ||||||||
| Expr1016860 | |||||||||
| Expr1142800 | |||||||||
| Expr2016030 | |||||||||
| Expr2034265 | |||||||||
| Drives_construct | WBCnstr00035303 | ||||||||
| Construct_product | WBCnstr00035303 | ||||||||
| WBCnstr00038806 | |||||||||
| Antibody | WBAntibody00000941 | ||||||||
| WBAntibody00000942 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction | WBInteraction000517439 | ||||||||
| WBInteraction000551224 | |||||||||
| WBInteraction000551229 | |||||||||
| WBInteraction000551230 | |||||||||
| WBInteraction000551231 | |||||||||
| WBInteraction000551232 | |||||||||
| WBInteraction000551233 | |||||||||
| WBInteraction000551234 | |||||||||
| WBInteraction000551259 | |||||||||
| WBProcess | WBbiopr:00000069 | ||||||||
| Map_info | Map | V | Position | 2.54257 | Error | 0.003561 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | AC3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 1191 | |||||||
| 1298 | |||||||||
| 1367 | |||||||||
| 1368 | |||||||||
| 2133 | |||||||||
| 2134 | |||||||||
| 3505 | |||||||||
| 4156 | |||||||||
| 5013 | |||||||||
| Pos_neg_data | 4769 | ||||||||
| 4770 | |||||||||
| 4771 | |||||||||
| 4772 | |||||||||
| 4773 | |||||||||
| 4774 | |||||||||
| Reference (20) | |||||||||
| Method | Gene |
