WormBase Tree Display for Gene: WBGene00004902

WBGene00004902 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: T13B5
  Identity: Version: 1
    Name: CGC_name: snf-3 Person_evidence: WBPerson508
      Sequence_name: T13B5.1
      Molecular_name: T13B5.1
        T13B5.1.1
        CE30176
      Other_name: CELE_T13B5.1 Accession_evidence: NDB BX284602
      Public_name: snf-3
    DB_info: Database: AceView gene 2B387
        WormQTL gene WBGene00004902
        WormFlux gene WBGene00004902
        NDB locus_tag CELE_T13B5.1
        Panther gene CAEEL|WormBase=WBGene00004902|UniProtKB=G5EBN9
          family PTHR11616
        NCBI gene 173493
        RefSeq protein NM_061509.10
        SwissProt UniProtAcc G5EBN9
        UniProt_GCRP UniProtAcc G5EBN9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snf
    Allele (141)
    Strain: WBStrain00029871
      WBStrain00033397
      WBStrain00033398
      WBStrain00033399
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00064665 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029344 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00159686 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127393 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226019 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12425 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3602 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2086 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15618 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1573 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25625 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13489 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12016 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g30111 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6935 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00343.g9482 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-snf-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9066 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02200.g25379 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_06698.g36898 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14384 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008088 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10215 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13065 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g13082 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g1662 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20019800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248375 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00278331 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267543 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-050420-179 Danio rerio From_analysis: OMA
            Panther
    Paralog (13)
    Structured_description: Automated_description: Enables amino-acid betaine transmembrane transporter activity. Involved in amino-acid betaine transport. Predicted to be located in neuron projection. Expressed in excretory canal; neurons; tail hypodermis; and vulval cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T13B5.1
    Corresponding_transcript: T13B5.1.1
    Other_sequence (45)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00018661 Inferred_automatically: RNAi_primary
      WBRNAi00053245 Inferred_automatically: RNAi_primary
      WBRNAi00018660 Inferred_automatically: RNAi_primary
      WBRNAi00053244 Inferred_automatically: RNAi_primary
      WBRNAi00000450 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1169
      Expr6688
      Expr11367
      Expr1011784
      Expr1032438
      Expr1156828
      Expr2015948
      Expr2034183
    Drives_construct: WBCnstr00003780
      WBCnstr00035333
    Construct_product: WBCnstr00018662
      WBCnstr00035333
    Microarray_results (21)
    Expression_cluster (161)
    Interaction (29)
  Map_info: Map: II Position: -15.5694
    Positive: Positive_clone: T13B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4672
        5442
        5516
    Pseudo_map_position
  Reference (12)
  Remark: Sequence connection from [Rand JB]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene