WormBase Tree Display for Gene: WBGene00004902
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| WBGene00004902 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T13B5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | snf-3 | Person_evidence | WBPerson508 | |||||
| Sequence_name | T13B5.1 | ||||||||
| Molecular_name | T13B5.1 | ||||||||
| T13B5.1.1 | |||||||||
| CE30176 | |||||||||
| Other_name | CELE_T13B5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | snf-3 | ||||||||
| DB_info | Database | AceView | gene | 2B387 | |||||
| WormQTL | gene | WBGene00004902 | |||||||
| WormFlux | gene | WBGene00004902 | |||||||
| NDB | locus_tag | CELE_T13B5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004902|UniProtKB=G5EBN9 | |||||||
| family | PTHR11616 | ||||||||
| NCBI | gene | 173493 | |||||||
| RefSeq | protein | NM_061509.10 | |||||||
| SwissProt | UniProtAcc | G5EBN9 | |||||||
| UniProt_GCRP | UniProtAcc | G5EBN9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snf | ||||||||
| Allele (141) | |||||||||
| Strain | WBStrain00029871 | ||||||||
| WBStrain00033397 | |||||||||
| WBStrain00033398 | |||||||||
| WBStrain00033399 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Enables amino-acid betaine transmembrane transporter activity. Involved in amino-acid betaine transport. Predicted to be located in neuron projection. Expressed in excretory canal; neurons; tail hypodermis; and vulval cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T13B5.1 | |||||||
| Corresponding_transcript | T13B5.1.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018661 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053245 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018660 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053244 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000450 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1169 | ||||||||
| Expr6688 | |||||||||
| Expr11367 | |||||||||
| Expr1011784 | |||||||||
| Expr1032438 | |||||||||
| Expr1156828 | |||||||||
| Expr2015948 | |||||||||
| Expr2034183 | |||||||||
| Drives_construct | WBCnstr00003780 | ||||||||
| WBCnstr00035333 | |||||||||
| Construct_product | WBCnstr00018662 | ||||||||
| WBCnstr00035333 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction | WBInteraction000165325 | ||||||||
| WBInteraction000170446 | |||||||||
| WBInteraction000174669 | |||||||||
| WBInteraction000182680 | |||||||||
| WBInteraction000201360 | |||||||||
| WBInteraction000204162 | |||||||||
| WBInteraction000248569 | |||||||||
| WBInteraction000251642 | |||||||||
| WBInteraction000252739 | |||||||||
| WBInteraction000262932 | |||||||||
| WBInteraction000274024 | |||||||||
| WBInteraction000288607 | |||||||||
| WBInteraction000321792 | |||||||||
| WBInteraction000323563 | |||||||||
| WBInteraction000326891 | |||||||||
| WBInteraction000389069 | |||||||||
| WBInteraction000395438 | |||||||||
| WBInteraction000396180 | |||||||||
| WBInteraction000399042 | |||||||||
| WBInteraction000402333 | |||||||||
| WBInteraction000410688 | |||||||||
| WBInteraction000415883 | |||||||||
| WBInteraction000458100 | |||||||||
| WBInteraction000463305 | |||||||||
| WBInteraction000465244 | |||||||||
| WBInteraction000469363 | |||||||||
| WBInteraction000520794 | |||||||||
| WBInteraction000564281 | |||||||||
| WBInteraction000580406 | |||||||||
| Map_info | Map | II | Position | -15.5694 | |||||
| Positive | Positive_clone | T13B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4672 | |||||||
| 5442 | |||||||||
| 5516 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Rand JB] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
