WormBase Tree Display for Gene: WBGene00004900
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WBGene00004900 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | W03G9 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | snf-1 | Person_evidence | WBPerson508 | |||||
Sequence_name | W03G9.1 | ||||||||
Molecular_name | W03G9.1 | ||||||||
W03G9.1.1 | |||||||||
CE30701 | |||||||||
Other_name | CELE_W03G9.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | snf-1 | ||||||||
DB_info | Database | AceView | gene | 1F551 | |||||
WormQTL | gene | WBGene00004900 | |||||||
WormFlux | gene | WBGene00004900 | |||||||
NDB | locus_tag | CELE_W03G9.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004900|UniProtKB=O44752 | |||||||
family | PTHR11616 | ||||||||
NCBI | gene | 172119 | |||||||
RefSeq | protein | NM_059090.10 | |||||||
TREEFAM | TREEFAM_ID | TF318135 | |||||||
TrEMBL | UniProtAcc | O44752 | |||||||
UniProt_GCRP | UniProtAcc | O44752 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 28 Sep 2010 16:54:30 | WBPerson2970 | Name_change | Other_name | gat-1 removed and attached to snf-11 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | snf | ||||||||
Allele (36) | |||||||||
Strain | WBStrain00031631 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033334 | ||||||||
00033335 | |||||||||
00033336 | |||||||||
00033337 | |||||||||
00113310 | |||||||||
Ortholog (36) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Predicted to enable symporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W03G9.1 | |||||||
Corresponding_transcript | W03G9.1.1 | ||||||||
Other_sequence (28) | |||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result | WBRNAi00077176 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001577 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004401 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077178 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077179 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054725 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116430 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077177 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026896 | ||||||||
Expr1032437 | |||||||||
Expr1158262 | |||||||||
Expr2015946 | |||||||||
Expr2034181 | |||||||||
Drives_construct | WBCnstr00035334 | ||||||||
Construct_product | WBCnstr00035334 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (121) | |||||||||
Interaction (20) | |||||||||
Map_info | Map | I | Position | -0.43441 | Error | 0.001612 | |||
Positive | Positive_clone | W03G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4786 | |||||||
5054 | |||||||||
5501 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00015781 | ||||||||
WBPaper00024600 | |||||||||
WBPaper00043908 | |||||||||
WBPaper00055090 | |||||||||
Remark | Sequence connection from [Rand JB] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |