WormBase Tree Display for Gene: WBGene00004822

WBGene00004822 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C42D4
  Identity: Version: 1
    Name: CGC_name: skr-16 Person_evidence: WBPerson322
      Sequence_name: C42D4.6
      Molecular_name: C42D4.6
        C42D4.6.1
        CE37712
      Other_name: CELE_C42D4.6 Accession_evidence: NDB BX284604
      Public_name: skr-16
    DB_info: Database: AceView gene 4H931
        WormQTL gene WBGene00004822
        WormFlux gene WBGene00004822
        NDB locus_tag CELE_C42D4.6
        Panther gene CAEEL|WormBase=WBGene00004822|UniProtKB=Q18567
          family PTHR11165
        NCBI gene 191765
        RefSeq protein NM_068727.7
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc Q18567
        UniProt_GCRP UniProtAcc Q18567
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (11)
    RNASeq_FPKM (74)
    GO_annotation: 00061674
      00061675
      00061676
      00061677
      00061678
      00113228
    Ortholog (75)
    Paralog (20)
    Structured_description: Concise_description: The skr-16 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-16(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C42D4.6
    Corresponding_CDS_history: C42D4.6:wp134
    Corresponding_transcript: C42D4.6.1
    Other_sequence: CBC00716_1
    Associated_feature: WBsf646067
      WBsf228510
  Experimental_info: RNAi_result: WBRNAi00086795 Inferred_automatically: RNAi_primary
      WBRNAi00042358 Inferred_automatically: RNAi_primary
      WBRNAi00069094 Inferred_automatically: RNAi_primary
      WBRNAi00094690 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018259
      Expr1032397
      Expr1146345
      Expr2015843
      Expr2034076
    Drives_construct: WBCnstr00035362
    Construct_product: WBCnstr00035362
    Microarray_results (17)
    Expression_cluster (103)
    Interaction (20)
  Map_info: Map: IV Position: 3.29126 Error: 5.7e-05
    Positive: Positive_clone: C42D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene