WormBase Tree Display for Gene: WBGene00004820

WBGene00004820 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y47D7A
  Identity: Version: 1
    Name: CGC_name: skr-14 Person_evidence: WBPerson322
      Sequence_name: Y47D7A.8
      Molecular_name: Y47D7A.8
        Y47D7A.8.1
        CE51413
      Other_name: Y47D7A.g Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y47D7A.8 Accession_evidence: NDB BX284605
      Public_name: skr-14
    DB_info: Database: AceView gene 5E900
        WormQTL gene WBGene00004820
        WormFlux gene WBGene00004820
        NDB locus_tag CELE_Y47D7A.8
        Panther gene CAEEL|WormBase=WBGene00004820|UniProtKB=Q9N3U9
          family PTHR11165
        NCBI gene 178839
        RefSeq protein NM_071819.7
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc Q9N3U9
        UniProt_GCRP UniProtAcc Q9N3U9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (20)
    RNASeq_FPKM (74)
    GO_annotation: 00094054
      00094055
      00094056
      00094057
      00094058
      00113226
    Ortholog (100)
    Paralog (20)
    Structured_description: Concise_description: The skr-14 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-14(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y47D7A.8
    Corresponding_CDS_history: Y47D7A.8:wp252
    Corresponding_transcript: Y47D7A.8.1
    Other_sequence: JO468941.1
      JI173630.1
    Associated_feature: WBsf652573
      WBsf652574
      WBsf668881
      WBsf668882
      WBsf668883
      WBsf999784
      WBsf233582
  Experimental_info: RNAi_result: WBRNAi00020710 Inferred_automatically: RNAi_primary
      WBRNAi00086804 Inferred_automatically: RNAi_primary
      WBRNAi00094696 Inferred_automatically: RNAi_primary
      WBRNAi00069092 Inferred_automatically: RNAi_primary
      WBRNAi00056789 Inferred_automatically: RNAi_primary
      WBRNAi00086793 Inferred_automatically: RNAi_primary
      WBRNAi00002340 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1032395
      Expr1160246
      Expr2015841
      Expr2034074
    Drives_construct: WBCnstr00035364
    Construct_product: WBCnstr00035364
    Microarray_results: SMD_Y47D7A_138.D
      176631_s_at
      A_12_P114809
      Aff_Y47D7A_138.D
      GPL19516_CGZ0046973
      GPL21109_Y47D7A.8
      GPL8304_CE_WBGene00004820_C
      GPL8673_Y47D7A_8P00535
    Expression_cluster (180)
    Interaction: WBInteraction000559611
      WBInteraction000580400
  Map_info: Map: V Position: -5.5234 Error: 0.02244
    Positive: Positive_clone: Y47D7A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene