WormBase Tree Display for Gene: WBGene00004795
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WBGene00004795 | SMap | S_parent | Sequence | C04F5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sid-1 | Person_evidence | WBPerson278 | |||||
Sequence_name | C04F5.1 | ||||||||
Molecular_name | C04F5.1 | ||||||||
C04F5.1.1 | |||||||||
CE30331 | |||||||||
Other_name | rsd-8 | Person_evidence | WBPerson1521 | ||||||
WBPerson1463 | |||||||||
WBPerson2581 | |||||||||
Author_evidence | Plasterk RHA | ||||||||
rde-7 | Paper_evidence | WBPaper00036036 | |||||||
CELE_C04F5.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | sid-1 | ||||||||
DB_info | Database | AceView | gene | 5F603 | |||||
WormQTL | gene | WBGene00004795 | |||||||
WormFlux | gene | WBGene00004795 | |||||||
NDB | locus_tag | CELE_C04F5.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004795|UniProtKB=Q9GZC8 | |||||||
family | PTHR12185 | ||||||||
NCBI | gene | 178900 | |||||||
RefSeq | protein | NM_071971.10 | |||||||
SwissProt | UniProtAcc | Q9GZC8 | |||||||
TREEFAM | TREEFAM_ID | TF313076 | |||||||
UniProt_GCRP | UniProtAcc | Q9GZC8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 16 Oct 2013 10:10:50 | WBPerson2970 | Name_change | Other_name | rde-7 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sid | ||||||||
Allele (206) | |||||||||
Strain (13) | |||||||||
In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (23) | |||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00012573 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00006477 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015583 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00018205 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00016253 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | C04F5.1 | |||||||
Corresponding_transcript | C04F5.1.1 | ||||||||
Other_sequence | CRC01416_1 | ||||||||
Tcol_isotig15794 | |||||||||
CJC06957_1 | |||||||||
MAC02131_1 | |||||||||
Associated_feature | WBsf1019590 | ||||||||
WBsf231727 | |||||||||
Experimental_info | RNAi_result | WBRNAi00076077 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039639 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00085060 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000928 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010132 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1867 | ||||||||
Expr11213 | |||||||||
Expr13321 | |||||||||
Expr1023218 | |||||||||
Expr1032379 | |||||||||
Expr1143735 | |||||||||
Expr2015814 | |||||||||
Expr2034047 | |||||||||
Drives_construct | WBCnstr00010496 | ||||||||
WBCnstr00018224 | |||||||||
WBCnstr00035384 | |||||||||
Construct_product (21) | |||||||||
Regulate_expr_cluster | WBPaper00064375:sid-1(pk3321)_regulated | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (131) | |||||||||
Interaction (29) | |||||||||
Anatomy_function | WBbtf0731 | ||||||||
Map_info | Map | V | Position | -2.49497 | Error | 0.00506 | |||
Positive | Positive_clone | C04F5 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5629 | |||||||
Pseudo_map_position | |||||||||
Reference (114) | |||||||||
Remark | Sequence connection from [Winston W, Hunter C] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |