WormBase Tree Display for Gene: WBGene00004746
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WBGene00004746 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sdc | ||||||
Allele (134) | |||||||
Legacy_information | See also y15 | ||||||
[C.elegansII] y15 : XX animals inviable and masculinized, XO animals WT. No maternal rescue. ES3 (XX); ME3.OA>20: y46, y74, y55 (weaker, Egl or Tra phenotypes). ???Cloned: 9.2 kb transcript, encodes predicted 2962 protein (344 kD), highly charged. [Nusbaum and Meyer 1989; TY] | |||||||
Strain | WBStrain00035098 | ||||||
WBStrain00035100 | |||||||
WBStrain00035166 | |||||||
WBStrain00035105 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00009802 | ||||||
00009803 | |||||||
00009804 | |||||||
00009805 | |||||||
00009806 | |||||||
00009807 | |||||||
00009808 | |||||||
Ortholog (33) | |||||||
Paralog | WBGene00018316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | The sdc-2 gene encodes a protein that represses transcription of X chromosomes to achieve dosage compensation, and that also represses the male sex-determination gene her-1 to elicit hermaphrodite differentiation. | Paper_evidence | WBPaper00005215 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Involved in dosage compensation by hypoactivation of X chromosome and negative regulation of transcription by RNA polymerase II. Located in nuclear chromosome. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C35C5.1 | |||||
Corresponding_transcript | C35C5.1.1 | ||||||
Other_sequence | AF111934 | ||||||
Associated_feature | WBsf663360 | ||||||
WBsf663361 | |||||||
WBsf663362 | |||||||
WBsf663363 | |||||||
WBsf1007030 | |||||||
WBsf1007031 | |||||||
WBsf1023889 | |||||||
WBsf236384 | |||||||
WBsf236385 | |||||||
Gene_product_binds | WBsf019092 | ||||||
WBsf019093 | |||||||
Transcription_factor | WBTranscriptionFactor000093 | ||||||
WBTranscriptionFactor000689 | |||||||
Experimental_info | RNAi_result (35) | ||||||
Expr_pattern | Expr10429 | ||||||
Expr11875 | |||||||
Expr1028636 | |||||||
Expr1032344 | |||||||
Expr1145975 | |||||||
Expr2015659 | |||||||
Expr2033892 | |||||||
Drives_construct | WBCnstr00006791 | ||||||
WBCnstr00015322 | |||||||
WBCnstr00035415 | |||||||
Construct_product | WBCnstr00005103 | ||||||
WBCnstr00005104 | |||||||
WBCnstr00006790 | |||||||
WBCnstr00006791 | |||||||
WBCnstr00035415 | |||||||
Antibody | WBAntibody00000228 | ||||||
WBAntibody00000496 | |||||||
WBAntibody00000497 | |||||||
WBAntibody00001184 | |||||||
WBAntibody00002039 | |||||||
WBAntibody00002042 | |||||||
WBAntibody00002043 | |||||||
Microarray_results (21) | |||||||
Expression_cluster (134) | |||||||
Interaction (77) | |||||||
WBProcess | WBbiopr:00000056 | ||||||
Map_info | Map | X | Position | 4.34757 | Error | 0.06798 | |
Well_ordered | |||||||
Positive | Inside_rearr | yDp7 | |||||
Positive_clone | C03B2 | ||||||
C35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 1438 | |||||
1439 | |||||||
1440 | |||||||
1774 | |||||||
2062 | |||||||
2293 | |||||||
3319 | |||||||
3642 | |||||||
3643 | |||||||
3687 | |||||||
Pos_neg_data (11) | |||||||
Landmark_gene | |||||||
Reference (135) | |||||||
Method | Gene |