WormBase Tree Display for Gene: WBGene00004704
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| WBGene00004704 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rsp-7 | Person_evidence | WBPerson297 | |||||
| Sequence_name | D2089.1 | ||||||||
| Molecular_name | D2089.1a | ||||||||
| D2089.1a.1 | |||||||||
| CE03111 | |||||||||
| D2089.1b | |||||||||
| CE30507 | |||||||||
| D2089.1b.1 | |||||||||
| D2089.1b.2 | |||||||||
| Other_name | CELE_D2089.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rsp-7 | ||||||||
| DB_info | Database | AceView | gene | 2K951 | |||||
| WormQTL | gene | WBGene00004704 | |||||||
| WormFlux | gene | WBGene00004704 | |||||||
| NDB | locus_tag | CELE_D2089.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004704|UniProtKB=O01159 | |||||||
| family | PTHR32343 | ||||||||
| NCBI | gene | 174646 | |||||||
| RefSeq | protein | NM_001383939.2 | |||||||
| NM_001393181.1 | |||||||||
| SwissProt | UniProtAcc | O01159 | |||||||
| TREEFAM | TREEFAM_ID | TF106266 | |||||||
| UniProt_GCRP | UniProtAcc | O01159 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rsp | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00036756 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024426 | ||||||||
| 00024427 | |||||||||
| 00024428 | |||||||||
| 00024429 | |||||||||
| 00024430 | |||||||||
| 00024431 | |||||||||
| 00024432 | |||||||||
| 00024433 | |||||||||
| 00113088 | |||||||||
| 00113089 | |||||||||
| Ortholog (28) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0050908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10782) | ||||
| DOID:0060041 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10782) | ||||||
| Molecular_info | Corresponding_CDS | D2089.1a | |||||||
| D2089.1b | |||||||||
| Corresponding_CDS_history | D2089.1:wp77 | ||||||||
| Corresponding_transcript | D2089.1a.1 | ||||||||
| D2089.1b.1 | |||||||||
| D2089.1b.2 | |||||||||
| Other_sequence (51) | |||||||||
| Associated_feature | WBsf047599 | ||||||||
| WBsf658153 | |||||||||
| WBsf658154 | |||||||||
| WBsf222047 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1015913 | ||||||||
| Expr1032324 | |||||||||
| Expr1147502 | |||||||||
| Expr2015564 | |||||||||
| Expr2033799 | |||||||||
| Drives_construct | WBCnstr00035430 | ||||||||
| Construct_product | WBCnstr00035430 | ||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | II | Position | 3.12321 | |||||
| Positive | Positive_clone | D2089 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003988 | ||||||||
| WBPaper00026593 | |||||||||
| WBPaper00030511 | |||||||||
| WBPaper00035228 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (3.12304) | |||||||||
| Method | Gene |
