WormBase Tree Display for Gene: WBGene00004463
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| WBGene00004463 | Evidence | CGC_data_submission | |||||
|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F49C12 | ||||
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | rpn | ||||||
| Allele (24) | |||||||
| Strain | WBStrain00002821 | ||||||
| WBStrain00003270 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00068460 | ||||||
| 00068461 | |||||||
| 00068462 | |||||||
| 00068463 | |||||||
| Contained_in_operon | CEOP4680 | ||||||
| Ortholog (39) | |||||||
| Paralog | WBGene00000813 | Caenorhabditis elegans | From_analysis | Panther | |||
| WormBase-Compara | |||||||
| Structured_description | Concise_description | rpn-7 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that affects fertility and embryonic viability. | Paper_evidence | WBPaper00004651 | |||
| WBPaper00004888 | |||||||
| WBPaper00005599 | |||||||
| WBPaper00005654 | |||||||
| WBPaper00006395 | |||||||
| Curator_confirmed | WBPerson48 | ||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
| Automated_description | Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome regulatory particle. Expressed in tail. Is an ortholog of human PSMD6 (proteasome 26S subunit, non-ATPase 6). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | F49C12.8 | |||||
| Corresponding_transcript | F49C12.8.1 | ||||||
| F49C12.8.2 | |||||||
| Other_sequence (109) | |||||||
| Associated_feature | WBsf655039 | ||||||
| WBsf660503 | |||||||
| WBsf228808 | |||||||
| WBsf228809 | |||||||
| Experimental_info | RNAi_result (40) | ||||||
| Expr_pattern | Chronogram114 | ||||||
| Chronogram1724 | |||||||
| Expr6121 | |||||||
| Expr6122 | |||||||
| Expr12710 | |||||||
| Expr1014849 | |||||||
| Expr1032266 | |||||||
| Expr1151643 | |||||||
| Expr2015495 | |||||||
| Expr2033730 | |||||||
| Drives_construct | WBCnstr00003348 | ||||||
| WBCnstr00004585 | |||||||
| WBCnstr00035466 | |||||||
| Construct_product | WBCnstr00035466 | ||||||
| Microarray_results (21) | |||||||
| Expression_cluster (171) | |||||||
| Interaction (200) | |||||||
| Map_info | Map | IV | Position | 4.16054 | Error | 0.004059 | |
| Positive | Positive_clone | F49C12 | Inferred_automatically | From CDS info | |||
| From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||
| Reference (18) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
