WormBase Tree Display for Gene: WBGene00004461
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WBGene00004461 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F10G7 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rpn | ||||||
Allele (36) | |||||||
Strain | WBStrain00003178 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00064355 | ||||||
00064356 | |||||||
00064357 | |||||||
00064358 | |||||||
Ortholog (45) | |||||||
Paralog | WBGene00000816 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to be located in cytoplasm. Predicted to be part of proteasome regulatory particle, lid subcomplex. Is an ortholog of human PSMD12 (proteasome 26S subunit, non-ATPase 12). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F10G7.8 | |||||
Corresponding_transcript | F10G7.8.1 | ||||||
F10G7.8.2 | |||||||
Other_sequence (77) | |||||||
Associated_feature | WBsf650009 | ||||||
WBsf222942 | |||||||
WBsf222943 | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Chronogram2010 | ||||||
Expr5728 | |||||||
Expr1014181 | |||||||
Expr1032264 | |||||||
Expr1148259 | |||||||
Expr2015492 | |||||||
Expr2033727 | |||||||
Drives_construct | WBCnstr00003654 | ||||||
WBCnstr00035467 | |||||||
Construct_product | WBCnstr00035467 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (157) | |||||||
Interaction (177) | |||||||
Map_info | Map | II | Position | -3.61141 | Error | 0.007674 | |
Positive | Positive_clone | F10G7 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00029221 | ||||||
WBPaper00030965 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00056008 | |||||||
WBPaper00056554 | |||||||
WBPaper00061547 | |||||||
WBPaper00061698 | |||||||
WBPaper00063122 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |