WormBase Tree Display for Gene: WBGene00004449
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| WBGene00004449 | SMap | S_parent | Sequence | ZK652 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rpl-35 | |||||||
| Sequence_name | ZK652.4 | ||||||||
| Molecular_name | ZK652.4 | ||||||||
| ZK652.4.1 | |||||||||
| CE00450 | |||||||||
| Other_name | CELE_ZK652.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rpl-35 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpl | ||||||||
| Allele (13) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rpl35 using blastP | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00020437 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | rpl-35 encodes a large ribosomal subunit L35 protein. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 19. Is an ortholog of human RPL35 (ribosomal protein L35). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111886 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10344) | ||||
| Molecular_info | Corresponding_CDS | ZK652.4 | |||||||
| Corresponding_transcript | ZK652.4.1 | ||||||||
| Other_sequence (342) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1010461 | ||||||||
| Expr1032253 | |||||||||
| Expr1163023 | |||||||||
| Expr2015467 | |||||||||
| Expr2033702 | |||||||||
| Drives_construct | WBCnstr00035477 | ||||||||
| Construct_product | WBCnstr00035477 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (199) | |||||||||
| Map_info | Map | III | Position | -0.554535 | Error | 0.003871 | |||
| Positive | Positive_clone | ZK652 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004403 | ||||||||
| WBPaper00005654 | |||||||||
| WBPaper00025088 | |||||||||
| WBPaper00035149 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062604 | |||||||||
| WBPaper00065861 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
