WormBase Tree Display for Gene: WBGene00004442

WBGene00004442 SMap: S_parent: Sequence: R11D1
  Identity: Version: 1
    Name: CGC_name: rpl-28
      Sequence_name: R11D1.8
      Molecular_name: R11D1.8
        R11D1.8.1
        CE06313
        R11D1.8.2
      Other_name: CELE_R11D1.8 Accession_evidence: NDB BX284605
      Public_name: rpl-28
    DB_info: Database: AceView gene 5N208
        WormQTL gene WBGene00004442
        WormFlux gene WBGene00004442
        NDB locus_tag CELE_R11D1.8
        Panther gene CAEEL|WormBase=WBGene00004442|UniProtKB=Q21930
          family PTHR10544
        NCBI gene 179739
        RefSeq protein NM_001383425.2
        SwissProt UniProtAcc Q21930
        TREEFAM TREEFAM_ID TF300173
        UniProt_GCRP UniProtAcc Q21930
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (19)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl28 using blastP
    Strain: WBStrain00003488
      WBStrain00003489
    RNASeq_FPKM (74)
    GO_annotation: 00073393
      00073394
      00073395
      00073396
      00073397
      00112886
      00112887
      00112888
    Ortholog (35)
    Structured_description: Concise_description: rpl-28 encodes a large ribosomal subunit L28 protein. Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL28 (ribosomal protein L28). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R11D1.8
    Corresponding_transcript: R11D1.8.1
      R11D1.8.2
    Other_sequence (91)
    Associated_feature: WBsf655599
      WBsf234714
  Experimental_info: RNAi_result: WBRNAi00026092 Inferred_automatically: RNAi_primary
      WBRNAi00051784 Inferred_automatically: RNAi_primary
      WBRNAi00026093 Inferred_automatically: RNAi_primary
      WBRNAi00017749 Inferred_automatically: RNAi_primary
      WBRNAi00033333 Inferred_automatically: RNAi_primary
      WBRNAi00111678 Inferred_automatically: RNAi_primary
      WBRNAi00051783 Inferred_automatically: RNAi_primary
      WBRNAi00027440 Inferred_automatically: RNAi_primary
      WBRNAi00051785 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram432
      Expr6505
      Expr6506
      Expr1027130
      Expr1032246
      Expr1155447
      Expr2015459
      Expr2033694
    Drives_construct (33)
    Construct_product: WBCnstr00035483
      WBCnstr00042414
    Microarray_results (21)
    Expression_cluster (168)
    Interaction (141)
  Map_info: Map: V Position: 4.61576 Error: 0.000286
    Positive: Positive_clone: R11D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00057217
    WBPaper00061952
    WBPaper00062385
    WBPaper00064403
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene