WormBase Tree Display for Gene: WBGene00004405
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| WBGene00004405 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rop-1 | |||||||
| Sequence_name | C12D8.11 | ||||||||
| Molecular_name | C12D8.11 | ||||||||
| C12D8.11.1 | |||||||||
| CE15613 | |||||||||
| Other_name | rop1 | Accession_evidence | EMBL | U21487 | |||||
| Ro | Paper_evidence | WBPaper00002296 | |||||||
| CELE_C12D8.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | rop-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rop | ||||||||
| Allele (42) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted 643 aa protein, 36% identity to human and Xenopus Ro proteins. Antibody detects 69 kD protein, which coprecipitates with and binds to small Y RNA encoded by yrn-1. [Van Horn et al. 1995; Labbe et al. 1995; LR] | ||||||||
| Strain | WBStrain00026659 | ||||||||
| WBStrain00032716 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00079480 | ||||||||
| 00079481 | |||||||||
| 00079482 | |||||||||
| 00079483 | |||||||||
| 00079484 | |||||||||
| 00079485 | |||||||||
| 00079486 | |||||||||
| 00112786 | |||||||||
| Ortholog (51) | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | C12D8.11 | |||||||
| Corresponding_transcript | C12D8.11.1 | ||||||||
| Other_sequence (65) | |||||||||
| Associated_feature (7) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00067083 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00066953 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067243 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002288 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027804 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067081 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010652 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1298 | ||||||||
| Expr1299 | |||||||||
| Expr7434 | |||||||||
| Expr1016369 | |||||||||
| Expr1032212 | |||||||||
| Expr1144453 | |||||||||
| Expr2015412 | |||||||||
| Expr2033647 | |||||||||
| Drives_construct | WBCnstr00000280 | ||||||||
| WBCnstr00001907 | |||||||||
| WBCnstr00012577 | |||||||||
| WBCnstr00035508 | |||||||||
| Construct_product | WBCnstr00001907 | ||||||||
| WBCnstr00035508 | |||||||||
| Antibody | WBAntibody00001791 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | V | Position | 2.43009 | Error | 0.002437 | |||
| Positive | Positive_clone | C12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (21) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
