WormBase Tree Display for Gene: WBGene00004358
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WBGene00004358 | SMap | S_parent | Sequence | F08F3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rhr | ||||||
Allele (35) | |||||||
Legacy_information | [Nettell J] rhr for Rh blood group antigen related. No mutants known. Predicted gene F08F3.3 | ||||||
Strain | WBStrain00003312 | ||||||
WBStrain00030768 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (52) | |||||||
Paralog | WBGene00000133 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00000134 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00000135 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00000136 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004359 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Concise_description | rhr-1 encodes an ortholog of human Rhesus blood-group associated glycoprotein (RHAG; OMIM:180297, mutated in chronic hemolytic anemia), a member of the ammonium transporter family, and affects general levels of mRNA transcripts, and embryonic viability in a large-scale RNAi screen. | Paper_evidence | WBPaper00004651 | |||
WBPaper00019491 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1823 | |||||||
WBPerson567 | |||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables ammonium transmembrane transporter activity. Involved in ammonium transmembrane transport. Predicted to be located in plasma membrane. Expressed in head. Human ortholog(s) of this gene implicated in Rh deficiency syndrome; Rh isoimmunization; and overhydrated hereditary stomatocytosis. Is an ortholog of human RHAG (Rh associated glycoprotein); RHBG (Rh family B glycoprotein); and RHCG (Rh family C glycoprotein). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050641 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||
DOID:4175 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10009) | ||||
DOID:0111562 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||||
DOID:583 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||||
Molecular_info | Corresponding_CDS | F08F3.3 | |||||
Corresponding_transcript | F08F3.3.1 | ||||||
Other_sequence (59) | |||||||
Associated_feature | WBsf231758 | ||||||
WBsf231759 | |||||||
Experimental_info | RNAi_result | WBRNAi00030654 | Inferred_automatically | RNAi_primary | |||
WBRNAi00077594 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002398 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044017 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram125 | ||||||
Expr3969 | |||||||
Expr5683 | |||||||
Expr5684 | |||||||
Expr1017093 | |||||||
Expr1032175 | |||||||
Expr1147985 | |||||||
Expr2015339 | |||||||
Expr2033573 | |||||||
Drives_construct | WBCnstr00002746 | ||||||
WBCnstr00003783 | |||||||
WBCnstr00035541 | |||||||
Construct_product | WBCnstr00035541 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (237) | |||||||
Interaction (35) | |||||||
Map_info | Map | V | Position | -2.02048 | Error | 0.028616 | |
Positive | Positive_clone | F08F3 | Author_evidence | Nettell JJ | |||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Multi_point | 5216 | |||||
4182 | |||||||
4348 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00004651 | ||||||
WBPaper00019491 | |||||||
WBPaper00027209 | |||||||
WBPaper00032929 | |||||||
WBPaper00038491 | |||||||
WBPaper00041771 | |||||||
WBPaper00046515 | |||||||
WBPaper00049246 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |