WormBase Tree Display for Gene: WBGene00004228
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| WBGene00004228 | Evidence | CGC_data_submission | |||||
|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R09H10 | ||||
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | ptr | ||||||
| Allele (64) | |||||||
| Strain | WBStrain00047593 | ||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00073209 | ||||||
| 00073210 | |||||||
| 00073211 | |||||||
| 00073212 | |||||||
| 00073213 | |||||||
| 00073214 | |||||||
| 00112518 | |||||||
| 00112519 | |||||||
| 00112520 | |||||||
| Ortholog (33) | |||||||
| Paralog (30) | |||||||
| Structured_description | Concise_description | ptr-14 encodes a nematode-specific member of the sterol sensing domain(SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) andhuman PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-14is weakly required for normal molting from L4 to adult stages; PTR-14 isalso required for normal growth to full size and locomotion. | Paper_evidence | WBPaper00006465 | |||
| WBPaper00026841 | |||||||
| WBPaper00027263 | |||||||
| Curator_confirmed | WBPerson567 | ||||||
| Date_last_updated | 08 Nov 2006 00:00:00 | ||||||
| Automated_description | Predicted to enable transmembrane transporter activity. Involved in molting cycle. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | R09H10.4 | |||||
| Corresponding_transcript | R09H10.4.1 | ||||||
| Other_sequence (17) | |||||||
| Associated_feature (15) | |||||||
| Experimental_info | RNAi_result | WBRNAi00034794 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00076954 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076922 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00066531 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051649 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1024743 | ||||||
| Expr1032080 | |||||||
| Expr1155320 | |||||||
| Expr2015157 | |||||||
| Expr2033395 | |||||||
| Drives_construct | WBCnstr00035621 | ||||||
| Construct_product | WBCnstr00035621 | ||||||
| Microarray_results (19) | |||||||
| Expression_cluster (171) | |||||||
| Interaction | WBInteraction000239614 | ||||||
| WBInteraction000279890 | |||||||
| WBInteraction000468494 | |||||||
| WBInteraction000471924 | |||||||
| WBInteraction000543454 | |||||||
| Map_info | Map | IV | Position | 4.64153 | Error | 0.000219 | |
| Positive | Positive_clone | R09H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00004265 | ||||||
| WBPaper00006465 | |||||||
| WBPaper00026841 | |||||||
| WBPaper00032230 | |||||||
| WBPaper00038491 | |||||||
| WBPaper00055090 | |||||||
| WBPaper00064105 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
