WormBase Tree Display for Gene: WBGene00004173
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WBGene00004173 | SMap | S_parent | Sequence | ZC15 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pqn | ||||||
Allele (42) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (19) | |||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in pharyngeal muscle cell and pm7 based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including rotenone; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZC15.8 | |||||
Corresponding_transcript | ZC15.8.1 | ||||||
Other_sequence | CBC04716_1 | ||||||
CR12113 | |||||||
CRC02891_1 | |||||||
CJC06183_1 | |||||||
CBC08557_1 | |||||||
Associated_feature | WBsf653601 | ||||||
WBsf1003500 | |||||||
WBsf1003501 | |||||||
WBsf1003502 | |||||||
WBsf1021926 | |||||||
WBsf1021927 | |||||||
Experimental_info | RNAi_result | WBRNAi00058746 | Inferred_automatically | RNAi_primary | |||
WBRNAi00021577 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037956 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020768 | ||||||
Expr1032035 | |||||||
Expr1162167 | |||||||
Expr2015083 | |||||||
Expr2033319 | |||||||
Drives_construct | WBCnstr00035656 | ||||||
Construct_product | WBCnstr00035656 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (210) | |||||||
Interaction | WBInteraction000579172 | ||||||
Map_info | Map | V | Position | 24.9816 | Error | 0.000505 | |
Positive | Positive_clone | ZC15 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00039614 | ||||||
WBPaper00043777 | |||||||
WBPaper00048136 | |||||||
WBPaper00064648 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |