WormBase Tree Display for Gene: WBGene00004157
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WBGene00004157 | SMap | S_parent | Sequence | W03D2 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pqn | ||||||
Allele (126) | |||||||
Strain | WBStrain00006421 | ||||||
WBStrain00006427 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00072893 | Caenorhabditis remanei | From_analysis | OMA | |||
Inparanoid_8 | |||||||
WBGene00040245 | Caenorhabditis briggsae | From_analysis | OMA | ||||
CSP28.g10836 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||
CSP29.g7544 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||
CSP32.g16311 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||
CSP39.g201 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
Sp34_40016300 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g10105 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Expressed in pharyngeal gland cell and pharynx. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | W03D2.1a | |||||
W03D2.1b | |||||||
W03D2.1c | |||||||
W03D2.1e | |||||||
Corresponding_transcript | W03D2.1d | ||||||
W03D2.1a.1 | |||||||
W03D2.1b.1 | |||||||
W03D2.1c.1 | |||||||
W03D2.1e.1 | |||||||
Other_sequence | BXC01391_1 | ||||||
Tcol_isotig02318 | |||||||
BXC00779_1 | |||||||
CJC08237_1 | |||||||
BXC02913_1 | |||||||
CRC11321_1 | |||||||
Associated_feature (12) | |||||||
Transcription_factor | WBTranscriptionFactor001078 | ||||||
Experimental_info | RNAi_result | WBRNAi00019548 | Inferred_automatically | RNAi_primary | |||
WBRNAi00054671 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036223 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054680 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2073 | ||||||
Expr13520 | |||||||
Expr1027027 | |||||||
Expr1032027 | |||||||
Expr1158211 | |||||||
Expr2015072 | |||||||
Expr2033307 | |||||||
Construct_product | WBCnstr00016549 | ||||||
Microarray_results (32) | |||||||
Expression_cluster (215) | |||||||
Interaction | WBInteraction000319230 | ||||||
WBInteraction000519927 | |||||||
WBInteraction000530217 | |||||||
WBInteraction000531344 | |||||||
Map_info | Map | IV | Position | -0.769722 | Error | 0.03339 | |
Positive | Positive_clone | W03D2 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00036048 | ||||||
WBPaper00053071 | |||||||
WBPaper00064648 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |