WormBase Tree Display for Gene: WBGene00004144
expand all nodes | collapse all nodes | view schema
WBGene00004144 | SMap | S_parent | Sequence | R11G11 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | srlf | |||||
Allele | WBVar01499528 | |||||
WBVar01499167 | ||||||
WBVar02122833 | ||||||
WBVar01499740 | ||||||
WBVar01518953 | ||||||
WBVar01518954 | ||||||
WBVar01518955 | ||||||
WBVar01518956 | ||||||
WBVar01518957 | ||||||
WBVar01518958 | ||||||
WBVar01518959 | ||||||
WBVar01495344 | ||||||
WBVar01518960 | ||||||
WBVar01518961 | ||||||
WBVar01518962 | ||||||
WBVar01518963 | ||||||
WBVar01518964 | ||||||
WBVar01518965 | ||||||
WBVar01518966 | ||||||
WBVar01518967 | ||||||
WBVar01498849 | ||||||
WBVar01518968 | ||||||
WBVar00980005 | ||||||
WBVar01518969 | ||||||
WBVar01498850 | ||||||
WBVar00980006 | ||||||
WBVar00980007 | ||||||
WBVar00980008 | ||||||
WBVar00980009 | ||||||
WBVar01499775 | ||||||
WBVar00980010 | ||||||
WBVar01773859 | ||||||
WBVar02082600 | ||||||
WBVar02120511 | ||||||
WBVar01498906 | ||||||
WBVar00447924 | ||||||
WBVar01499674 | ||||||
WBVar01499675 | ||||||
WBVar01500066 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00029013 | |||||
00029014 | ||||||
Ortholog (27) | ||||||
Paralog (39) | ||||||
Structured_description | Concise_description | pqn-60 encodes a 154-residue, glutamine/asparagine (Q/N)-rich('prion'-like) protein, predicted to have coiled-coil structure, withmany paralogs in nematodes but no obvious non-nematode orthologs; PQN-60inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1,RAD-50, and RAD-51. | Paper_evidence | WBPaper00005068 | ||
WBPaper00012788 | ||||||
WBPaper00012830 | ||||||
WBPaper00012882 | ||||||
WBPaper00012897 | ||||||
WBPaper00013003 | ||||||
WBPaper00023909 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 21 Apr 2007 00:00:00 | |||||
Automated_description | Enriched in ABaraapapaa; ABaraapppaa; arcade cell; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R11G11.7 | ||||
Corresponding_transcript | R11G11.7.1 | |||||
Associated_feature | WBsf979050 | |||||
WBsf231344 | ||||||
WBsf231345 | ||||||
Experimental_info | RNAi_result | WBRNAi00064188 | Inferred_automatically | RNAi_primary | ||
WBRNAi00051817 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00064214 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034873 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00017776 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1014988 | |||||
Expr1155477 | ||||||
Expr2015061 | ||||||
Expr2033296 | ||||||
Drives_construct | WBCnstr00035672 | |||||
Construct_product | WBCnstr00035672 | |||||
Microarray_results (14) | ||||||
Expression_cluster (214) | ||||||
Interaction (25) | ||||||
Map_info | Map | V | Position | -19.9855 | ||
Positive | Positive_clone | R11G11 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |