WormBase Tree Display for Gene: WBGene00004144
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WBGene00004144 | SMap | S_parent | Sequence | R11G11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | srlf-35 | Person_evidence | WBPerson260 | |||
Sequence_name | R11G11.7 | ||||||
Molecular_name | R11G11.7 | ||||||
R11G11.7.1 | |||||||
CE12752 | |||||||
Other_name | pqn-60 | Person_evidence | WBPerson260 | ||||
CELE_R11G11.7 | Accession_evidence | NDB | BX284605 | ||||
Public_name | srlf-35 | ||||||
DB_info | Database | AceView | gene | 5A979 | |||
WormQTL | gene | WBGene00004144 | |||||
WormFlux | gene | WBGene00004144 | |||||
NDB | locus_tag | CELE_R11G11.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00004144|UniProtKB=O16948 | |||||
family | PTHR21593 | ||||||
NCBI | gene | 187826 | |||||
RefSeq | protein | NM_070824.2 | |||||
TREEFAM | TREEFAM_ID | TF316074 | |||||
TrEMBL | UniProtAcc | O16948 | |||||
UniProt_GCRP | UniProtAcc | O16948 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | srlf | ||||||
Allele (39) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00029013 | ||||||
00029014 | |||||||
Ortholog (27) | |||||||
Paralog (39) | |||||||
Structured_description | Concise_description | pqn-60 encodes a 154-residue, glutamine/asparagine (Q/N)-rich('prion'-like) protein, predicted to have coiled-coil structure, withmany paralogs in nematodes but no obvious non-nematode orthologs; PQN-60inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1,RAD-50, and RAD-51. | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
WBPaper00023909 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 21 Apr 2007 00:00:00 | ||||||
Automated_description | Enriched in ABaraapapaa; ABaraapppaa; arcade cell; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R11G11.7 | |||||
Corresponding_transcript | R11G11.7.1 | ||||||
Associated_feature | WBsf979050 | ||||||
WBsf231344 | |||||||
WBsf231345 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | V | Position | -19.9855 | |||
Positive | Positive_clone | R11G11 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |