WormBase Tree Display for Gene: WBGene00004138
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| WBGene00004138 | SMap | S_parent | Sequence | R07B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-53 | Person_evidence | WBPerson625 | |||||
| Sequence_name | R07B7.3 | ||||||||
| Molecular_name | R07B7.3a | ||||||||
| R07B7.3a.1 | |||||||||
| CE42927 | |||||||||
| R07B7.3b | |||||||||
| Other_name | CELE_R07B7.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pqn-53 | ||||||||
| DB_info | Database | AceView | gene | 5M544 | |||||
| WormQTL | gene | WBGene00004138 | |||||||
| WormFlux | gene | WBGene00004138 | |||||||
| NDB | locus_tag | CELE_R07B7.3 | |||||||
| NCBI | gene | 179656 | |||||||
| RefSeq | protein | NR_024311.1 | |||||||
| NM_073622.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF317724 | |||||||
| TrEMBL | UniProtAcc | Q21793 | |||||||
| UniProt_GCRP | UniProtAcc | Q21793 | |||||||
| RNAcentral | URSid | URS00001EAE26 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (24) | |||||||||
| Strain | WBStrain00037780 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072853 | ||||||||
| Contained_in_operon | CEOP5320 | ||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00011088 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07B7.3a | |||||||
| Corresponding_CDS_history | R07B7.3:wp193 | ||||||||
| Corresponding_transcript | R07B7.3b | ||||||||
| R07B7.3a.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf653183 | ||||||||
| WBsf653184 | |||||||||
| WBsf669466 | |||||||||
| WBsf234614 | |||||||||
| WBsf234615 | |||||||||
| WBsf234616 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034689 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017521 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051436 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9487 | ||||||||
| Expr1028249 | |||||||||
| Expr1032012 | |||||||||
| Expr1155124 | |||||||||
| Expr2015058 | |||||||||
| Expr2033293 | |||||||||
| Drives_construct | WBCnstr00035675 | ||||||||
| Construct_product | WBCnstr00014052 | ||||||||
| WBCnstr00035675 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | V | Position | 3.62372 | Error | 0.000837 | |||
| Positive | Positive_clone | R07B7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
