WormBase Tree Display for Gene: WBGene00004122

WBGene00004122 SMap: S_parent: Sequence: F35D11
  Identity: Version: 1
    Name: CGC_name: pqn-35 Person_evidence: WBPerson625
      Sequence_name: F35D11.2
      Molecular_name: F35D11.2a
        F35D11.2a.1
        CE32647
        F35D11.2b
        CE31802
        F35D11.2a.2
        F35D11.2a.3
        F35D11.2b.1
      Other_name: CELE_F35D11.2 Accession_evidence: NDB BX284602
      Public_name: pqn-35
    DB_info: Database: AceView gene 2E915
        WormQTL gene WBGene00004122
        WormFlux gene WBGene00004122
        NDB locus_tag CELE_F35D11.2
        NCBI gene 173800
        RefSeq protein NM_001381396.1
            NM_001393052.1
        TREEFAM TREEFAM_ID TF350187
        TrEMBL UniProtAcc Q20040
            Q8MQ61
        UniProt_GCRP UniProtAcc Q8MQ61
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    Allele (152)
    RNASeq_FPKM (74)
    GO_annotation: 00066893
    Ortholog: WBGene00065108 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034228 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142758 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126548 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00156301 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g7050 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1651 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7857 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g359 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12706 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27466 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15655 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9631 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g28601 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10152 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-pqn-35 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_06212.g36230 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06750 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004475 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14420 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20228100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4279 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00094301 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Concise_description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in membrane. Expressed in pharyngeal muscle cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F35D11.2a
      F35D11.2b
    Corresponding_CDS_history: F35D11.2a:wp88
    Corresponding_transcript: F35D11.2a.1
      F35D11.2a.2
      F35D11.2a.3
      F35D11.2b.1
    Other_sequence (15)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00046319 Inferred_automatically: RNAi_primary
      WBRNAi00103327 Inferred_automatically: RNAi_primary
      WBRNAi00014317 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2130
      Expr1021054
      Expr1031998
      Expr1150208
      Expr2015048
      Expr2033283
    Drives_construct: WBCnstr00035681
    Construct_product: WBCnstr00035681
    Microarray_results (23)
    Expression_cluster (204)
    Interaction (17)
  Map_info: Map: II Position: -3.81187 Error: 0.003663
    Positive: Positive_clone: F35D11 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026929
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene