WormBase Tree Display for Gene: WBGene00004108
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| WBGene00004108 | SMap | S_parent | Sequence | C34E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-18 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C34E7.1 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_C34E7.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pqn-18 | ||||||||
| DB_info | Database | AceView | gene | XN537 | |||||
| WormQTL | gene | WBGene00004108 | |||||||
| WormFlux | gene | WBGene00004108 | |||||||
| NDB | locus_tag | CELE_C34E7.1 | |||||||
| NCBI | gene | 181425 | |||||||
| RefSeq | protein | NM_001270276.4 | |||||||
| NM_001392865.1 | |||||||||
| NM_001270275.4 | |||||||||
| NM_001270274.4 | |||||||||
| TrEMBL | UniProtAcc | F5GU95 | |||||||
| Q18456 | |||||||||
| G1K843 | |||||||||
| F5GU96 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18456 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (193) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in head mesodermal cell; intestine; lateral ganglion; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including stavudine; Zidovudine; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34E7.1a | |||||||
| C34E7.1b | |||||||||
| C34E7.1c | |||||||||
| C34E7.1d | |||||||||
| Corresponding_CDS_history | C34E7.1:wp118 | ||||||||
| Corresponding_transcript | C34E7.1a.1 | ||||||||
| C34E7.1a.2 | |||||||||
| C34E7.1b.1 | |||||||||
| C34E7.1c.1 | |||||||||
| C34E7.1d.1 | |||||||||
| Other_sequence | JI466120.1 | ||||||||
| CBC06028_1 | |||||||||
| Associated_feature (40) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041903 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011611 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029533 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011612 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041902 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027784 | ||||||||
| Expr1031986 | |||||||||
| Expr1145912 | |||||||||
| Expr2015036 | |||||||||
| Expr2033271 | |||||||||
| Drives_construct | WBCnstr00035690 | ||||||||
| Construct_product | WBCnstr00035690 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction | WBInteraction000196403 | ||||||||
| WBInteraction000328747 | |||||||||
| Map_info | Map | X | Position | 8.93138 | |||||
| Positive | Positive_clone | C34E7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
