WormBase Tree Display for Gene: WBGene00004106

WBGene00004106 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: pqn-15 Person_evidence: WBPerson625
      Sequence_name: C24A8.3
      Molecular_name: C24A8.3
        C24A8.3.1
        CE52050
      Other_name: CELE_C24A8.3 Accession_evidence: NDB BX284606
      Public_name: pqn-15
    DB_info: Database: AceView gene XE922
        WormQTL gene WBGene00004106
        WormFlux gene WBGene00004106
        NDB locus_tag CELE_C24A8.3
        Panther gene CAEEL|WormBase=WBGene00004106|UniProtKB=P91094
          family PTHR10799
        NCBI gene 180705
        RefSeq protein NM_001380945.1
        TrEMBL UniProtAcc P91094
        UniProt_GCRP UniProtAcc P91094
        OMIM gene 603254
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    Allele (134)
    RNASeq_FPKM (74)
    GO_annotation: 00049938
      00049939
      00049940
      00049941
      00049942
      00049943
      00112388
      00112389
      00112390
    Ortholog (52)
    Paralog (19)
    Structured_description: Concise_description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable ATP-dependent activity, acting on DNA and DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in several diseases, including Coffin-Siris syndrome 4; carcinoma (multiple); and rhabdoid cancer. Is an ortholog of human SMARCA4 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070046 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11100)
      DOID:3908 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11100)
      DOID:10283 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11100)
      DOID:3672 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11100)
      DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11100)
  Molecular_info: Corresponding_CDS: C24A8.3
    Corresponding_CDS_history: C24A8.3:wp204
      C24A8.3:wp260
    Corresponding_transcript: C24A8.3.1
    Other_sequence (12)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00081568 Inferred_automatically: RNAi_primary
      WBRNAi00012299 Inferred_automatically: RNAi_primary
      WBRNAi00011082 Inferred_automatically: RNAi_primary
      WBRNAi00011083 Inferred_automatically: RNAi_primary
      WBRNAi00041059 Inferred_automatically: RNAi_primary
      WBRNAi00043018 Inferred_automatically: RNAi_primary
      WBRNAi00075546 Inferred_automatically: RNAi_primary
      WBRNAi00041058 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016374
      Expr1031985
      Expr1145096
      Expr2015034
      Expr2033269
    Drives_construct: WBCnstr00035692
    Construct_product: WBCnstr00035692
    Microarray_results (34)
    Expression_cluster (135)
    Interaction (58)
  Map_info: Map: X Position: -7.79221 Error: 0.001262
    Positive: Positive_clone: C24A8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5504
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene