WormBase Tree Display for Gene: WBGene00003948
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| WBGene00003948 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C47B2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | pbs-2 | Person_evidence | WBPerson1551 | |||||
| Sequence_name | C47B2.4 | ||||||||
| Molecular_name | C47B2.4 | ||||||||
| C47B2.4.1 | |||||||||
| CE17564 | |||||||||
| Other_name | CELE_C47B2.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pbs-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pbs | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00047688 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (43) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable endopeptidase activity. Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in nucleus. Predicted to be part of proteasome core complex, beta-subunit complex. Is an ortholog of human PSMB7 (proteasome 20S subunit beta 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060919 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9538) | ||||
| Molecular_info | Corresponding_CDS | C47B2.4 | |||||||
| Corresponding_transcript | C47B2.4.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf655322 | ||||||||
| WBsf220472 | |||||||||
| WBsf220473 | |||||||||
| Experimental_info | RNAi_result (34) | ||||||||
| Expr_pattern | Expr1021935 | ||||||||
| Expr1031874 | |||||||||
| Expr1146639 | |||||||||
| Expr2014766 | |||||||||
| Expr2033000 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (174) | |||||||||
| Map_info | Map | I | Position | 16.7897 | Error | 0.003219 | |||
| Positive | Positive_clone | C47B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024430 | ||||||||
| WBPaper00029221 | |||||||||
| WBPaper00030965 | |||||||||
| WBPaper00031416 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056008 | |||||||||
| WBPaper00056554 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00065312 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
