WormBase Tree Display for Gene: WBGene00003923

WBGene00003923 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: D1054
  Identity: Version: 1
    Name: CGC_name: pas-2 Person_evidence: WBPerson1551
      Sequence_name: D1054.2
      Molecular_name: D1054.2
        D1054.2.1
        CE05521
      Other_name: tag-166 CGC_data_submission
        CELE_D1054.2 Accession_evidence: NDB BX284605
      Public_name: pas-2
    DB_info: Database: AceView gene 5L251
        WormQTL gene WBGene00003923
        WormFlux gene WBGene00003923
        NDB locus_tag CELE_D1054.2
        Panther gene CAEEL|WormBase=WBGene00003923|UniProtKB=Q27488
          family PTHR11599
        NCBI gene 179493
        RefSeq protein NM_073349.9
        SwissProt UniProtAcc Q27488
        TREEFAM TREEFAM_ID TF106207
        UniProt_GCRP UniProtAcc Q27488
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pas
    Allele (20)
    Strain: WBStrain00035843
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP5260
    Ortholog (37)
    Paralog (13)
    Structured_description: Concise_description: pas-2 encodes a proteasome subunit with highest similarity to vertebrate proteasome alpha 2 subunits. Paper_evidence: WBPaper00005303
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables identical protein binding activity. Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of proteasome core complex, alpha-subunit complex. Is an ortholog of human PSMA2 (proteasome 20S subunit alpha 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D1054.2
    Corresponding_transcript: D1054.2.1
    Other_sequence (108)
    Associated_feature: WBsf647196
      WBsf647197
      WBsf232417
  Experimental_info: RNAi_result: WBRNAi00043391 Inferred_automatically: RNAi_primary
      WBRNAi00095043 Inferred_automatically: RNAi_primary
      WBRNAi00089486 Inferred_automatically: RNAi_primary
      WBRNAi00030346 Inferred_automatically: RNAi_primary
      WBRNAi00012533 Inferred_automatically: RNAi_primary
      WBRNAi00043392 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020889
      Expr1031856
      Expr1147380
      Expr2014741
      Expr2032975
    Drives_construct: WBCnstr00035795
    Construct_product: WBCnstr00035795
    Microarray_results (22)
    Expression_cluster (159)
    Interaction (191)
  Map_info: Map: V Position: 2.76584 Error: 0.003582
    Positive: Positive_clone: D1054 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4554
    Pseudo_map_position
  Reference: WBPaper00005303
    WBPaper00030965
    WBPaper00038491
    WBPaper00055090
    WBPaper00056008
    WBPaper00060474
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene