WormBase Tree Display for Gene: WBGene00003888
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WBGene00003888 | SMap | S_parent | Sequence | R07G3 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | osm | |||||
Allele (19) | ||||||
Legacy_information | [C.elegansII] n1518 : defective osmotic avoidance. NA1. [MT; JT] | |||||
Strain | WBStrain00027074 | |||||
WBStrain00033230 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00053788 | |||||
00053789 | ||||||
00053790 | ||||||
00053791 | ||||||
00053792 | ||||||
Ortholog (20) | ||||||
Structured_description | Concise_description | osm-8 encodes a mucin-like secreted protein with a PST (proline/serine/threonine) domain similar to the PST domain in human mucin, Muc2; osm-8 is a negative regulator of the osmotic stress response, mutants for osm-8 show inappropriate activation of physiological responses to osmotic stress; osm-8 acts through the hypodermally expressed transmembrane protein PTR-23 to activate osmosensitive gene expression, glycerol accumulation and other responses to osmotic stimuli; osm-8 is expressed in the hypodermis and is most likely secreted from the hypodermal apical membrane. | Paper_evidence | WBPaper00038064 | ||
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 21 Feb 2012 00:00:00 | |||||
Automated_description | Involved in regulation of gene expression and response to osmotic stress. Located in extracellular space. Expressed in hyp7 syncytium. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R07G3.6 | ||||
Corresponding_CDS_history | R07G3.6:wp248 | |||||
Corresponding_transcript | R07G3.6.1 | |||||
Other_sequence | Dviv_isotig26472 | |||||
Dviv_isotig29429 | ||||||
Associated_feature | WBsf650241 | |||||
WBsf223355 | ||||||
WBsf223356 | ||||||
Experimental_info | RNAi_result | WBRNAi00026059 | Inferred_automatically | RNAi_primary | ||
WBRNAi00027434 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00017565 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051501 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00026060 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034724 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051503 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr11207 | |||||
Expr1031831 | ||||||
Expr1155181 | ||||||
Expr2014647 | ||||||
Expr2032880 | ||||||
Drives_construct | WBCnstr00018220 | |||||
WBCnstr00035812 | ||||||
Construct_product | WBCnstr00035812 | |||||
Regulate_expr_cluster | WBPaper00035873:osm-8_regulated | |||||
Microarray_results (18) | ||||||
Expression_cluster (170) | ||||||
Interaction | WBInteraction000504743 | |||||
Map_info | Map | II | Position | 0.5056 | ||
Positive | Positive_clone | R07G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Mapping_data | Multi_point | 1361 | ||||
Pos_neg_data | 3715 | |||||
3716 | ||||||
Reference (15) | ||||||
Method | Gene |