WormBase Tree Display for Gene: WBGene00003843
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WBGene00003843 | Evidence | Accession_evidence | EMBL | AF199013 | |||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK455 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | oct-2 | |||||||
Sequence_name | ZK455.8 | ||||||||
Molecular_name | ZK455.8a | ||||||||
ZK455.8a.1 | |||||||||
CE31675 | |||||||||
ZK455.8b | |||||||||
CE40401 | |||||||||
ZK455.8b.1 | |||||||||
Other_name | CELE_ZK455.8 | Accession_evidence | NDB | BX284606 | |||||
Public_name | oct-2 | ||||||||
DB_info | Database | AceView | gene | XL967 | |||||
WormQTL | gene | WBGene00003843 | |||||||
WormFlux | gene | WBGene00003843 | |||||||
NDB | locus_tag | CELE_ZK455.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003843|UniProtKB=Q23501 | |||||||
family | PTHR24064 | ||||||||
NCBI | gene | 181325 | |||||||
RefSeq | protein | NM_077498.9 | |||||||
NM_001029821.6 | |||||||||
TrEMBL | UniProtAcc | G5EE82 | |||||||
Q23501 | |||||||||
UniProt_GCRP | UniProtAcc | Q23501 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 02 Aug 2006 14:47:54 | WBPerson2970 | Event | Acquires_merge | WBGene00013977 | ||||
Name_change | CGC_name | oct-2 | |||||||
Sequence_name | ZK455.8 | ||||||||
Acquires_merge | WBGene00013977 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | oct | ||||||||
Allele (54) | |||||||||
Strain | WBStrain00033205 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00015584 | ||||||||
00015585 | |||||||||
00111901 | |||||||||
00111902 | |||||||||
00111903 | |||||||||
Ortholog (34) | |||||||||
Paralog (28) | |||||||||
Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of human SLC22A15 (solute carrier family 22 member 15). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00059438 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022019 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115672 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016949 | ||||||||
Expr1031811 | |||||||||
Expr1162865 | |||||||||
Expr2014602 | |||||||||
Expr2032835 | |||||||||
Drives_construct | WBCnstr00035837 | ||||||||
Construct_product | WBCnstr00035837 | ||||||||
Microarray_results (28) | |||||||||
Expression_cluster (115) | |||||||||
Interaction | WBInteraction000140271 | ||||||||
WBInteraction000153016 | |||||||||
WBInteraction000467622 | |||||||||
Map_info | Map | X | Position | 3.07921 | Error | 0.029603 | |||
Positive | Positive_clone | ZK455 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00029012 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00044259 | |||||||||
WBPaper00050377 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |