WormBase Tree Display for Gene: WBGene00003806
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| WBGene00003806 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y77E11A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | npp-20 | Person_evidence | WBPerson1780 | |||||
| Sequence_name | Y77E11A.13 | ||||||||
| Molecular_name | Y77E11A.13a | ||||||||
| Y77E11A.13a.1 | |||||||||
| CE25614 | |||||||||
| Y77E11A.13b | |||||||||
| CE25615 | |||||||||
| Y77E11A.13b.1 | |||||||||
| Other_name | CeSec13R | Person_evidence | WBPerson1780 | ||||||
| Y77E11A_3670.c | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| sec-13 | Paper_evidence | WBPaper00038310 | |||||||
| WBPaper00050029 | |||||||||
| CELE_Y77E11A.13 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | npp-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (130) | |||||||||
| Strain | WBStrain00052114 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (33) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00003804 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable structural molecule activity. Involved in several processes, including organelle organization; positive regulation of division septum assembly; and protein import into nucleus. Part of nuclear pore. Is an ortholog of human SEC13 (SEC13 homolog, nuclear pore and COPII coat complex component). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y77E11A.13a | |||||||
| Y77E11A.13b | |||||||||
| Corresponding_transcript | Y77E11A.13a.1 | ||||||||
| Y77E11A.13b.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf651649 | ||||||||
| WBsf995464 | |||||||||
| WBsf995465 | |||||||||
| WBsf1016745 | |||||||||
| WBsf229770 | |||||||||
| WBsf229771 | |||||||||
| WBsf229772 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1025260 | ||||||||
| Expr1031792 | |||||||||
| Expr1161918 | |||||||||
| Expr2014380 | |||||||||
| Expr2032621 | |||||||||
| Antibody | WBAntibody00002225 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (75) | |||||||||
| Map_info | Map | IV | Position | -18.5129 | Error | 0.077116 | |||
| Positive | Positive_clone | Y77E11A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
