WormBase Tree Display for Gene: WBGene00003799

WBGene00003799 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y37E3
  Identity: Version: 1
    Name: CGC_name: npp-13 Person_evidence: WBPerson1780
      Sequence_name: Y37E3.15
      Molecular_name: Y37E3.15a
        Y37E3.15a.1
        CE26832
        Y37E3.15c
        CE49711
        Y37E3.15b
        Y37E3.15c.1
      Other_name: CeNup93 Person_evidence: WBPerson1780
        CELE_Y37E3.15 Accession_evidence: NDB BX284601
      Public_name: npp-13
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: npp
    Allele (742)
    Strain: WBStrain00036338
    RNASeq_FPKM (74)
    GO_annotation (28)
    Contained_in_operon: CEOP1995
    Ortholog: WBGene00060575 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00040719 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144899 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147556 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126292 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226658 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9690 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3429 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19492 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g19494 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11469 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11058 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7458 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8867 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21138 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20094 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g20113 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25689 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6814 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g18674 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g18677 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-npp-13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_I.g525 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17317 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00185.g6554 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00185.g6556 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18658 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001084 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14178 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14970 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10236110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g291 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238221 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304411 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263260 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286887 Trichuris muris From_analysis: WormBase-Compara
      WBGene00295977 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001898 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0027537 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0038274 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-990415-46 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28958 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919055 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1311525 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be a structural constituent of nuclear pore. Involved in several processes, including organelle organization; protein import into nucleus; and regulation of cell cycle. Predicted to be located in membrane and nucleus. Predicted to be part of nuclear pore. Human ortholog(s) of this gene implicated in nephrotic syndrome type 12. Is an ortholog of human NUP93 (nucleoporin 93). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080387 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:28958)
  Molecular_info: Corresponding_CDS: Y37E3.15a
      Y37E3.15c
    Corresponding_CDS_history: Y37E3.15b:wp242
    Corresponding_transcript: Y37E3.15b
      Y37E3.15a.1
      Y37E3.15c.1
    Other_sequence (34)
    Associated_feature (14)
  Experimental_info: RNAi_result: WBRNAi00000896 Inferred_automatically: RNAi_primary
      WBRNAi00078418 Inferred_automatically: RNAi_primary
      WBRNAi00078404 Inferred_automatically: RNAi_primary
      WBRNAi00078298 Inferred_automatically: RNAi_primary
      WBRNAi00055931 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023607
      Expr1031785
      Expr1159450
      Expr2014373
      Expr2032614
    Antibody: WBAntibody00002371
    Microarray_results (23)
    Expression_cluster (99)
    Interaction (64)
  Map_info: Map: I Position: -11.8161 Error: 0.100837
    Positive: Positive_clone: Y37E3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5628
        5674
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene