WormBase Tree Display for Gene: WBGene00003785
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WBGene00003785 | SMap | S_parent | Sequence | Y53C12B | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nos | ||||||
Allele (82) | |||||||
Strain | WBStrain00022580 | ||||||
WBStrain00022615 | |||||||
WBStrain00054810 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00031725 | ||||||
00031726 | |||||||
00031727 | |||||||
00031728 | |||||||
00031729 | |||||||
00031730 | |||||||
00031731 | |||||||
00037989 | |||||||
Ortholog (20) | |||||||
Structured_description | Concise_description | nos-3 encodes a homolog of Drosophila NANOS that physically interacts with FBF-1 (similar, though not orthologous, to Drosophila PUMILIO); NOS-3 is required in development of the hermaphrodite germ-line to promote the switch from sperm to oocyte production, perhaps by forming a complex with FBF-1 that controls fem-3 mRNA. | Paper_evidence | WBPaper00003692 | |||
WBPaper00005068 | |||||||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable RNA binding activity. Involved in positive regulation of meiotic nuclear division. Located in cytoplasm. Expressed in several structures, including Psub3; Psub4; Z2; Z3; and germ line. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y53C12B.3a | |||||
Y53C12B.3b | |||||||
Y53C12B.3c | |||||||
Y53C12B.3d | |||||||
Y53C12B.3e | |||||||
Corresponding_transcript | Y53C12B.3a.1 | ||||||
Y53C12B.3b.1 | |||||||
Y53C12B.3c.1 | |||||||
Y53C12B.3d.1 | |||||||
Y53C12B.3e.1 | |||||||
Other_sequence | CR00137 | ||||||
CRC05300_1 | |||||||
CR00136 | |||||||
MC05328 | |||||||
CR08429 | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result (13) | ||||||
Expr_pattern | Expr1202 | ||||||
Expr1203 | |||||||
Expr1011795 | |||||||
Expr1031771 | |||||||
Expr1160694 | |||||||
Expr2014358 | |||||||
Expr2032599 | |||||||
Drives_construct | WBCnstr00008698 | ||||||
WBCnstr00008699 | |||||||
WBCnstr00008700 | |||||||
WBCnstr00035868 | |||||||
Construct_product | WBCnstr00005242 | ||||||
WBCnstr00008698 | |||||||
WBCnstr00008699 | |||||||
WBCnstr00008700 | |||||||
WBCnstr00035868 | |||||||
Antibody | WBAntibody00000240 | ||||||
Microarray_results (42) | |||||||
Expression_cluster (117) | |||||||
Interaction (122) | |||||||
Map_info | Map | II | Position | 1.70862 | Error | 0.00125 | |
Positive | Positive_clone | Y53C12B | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4543 | |||||
5522 | |||||||
Pseudo_map_position | |||||||
Reference (65) | |||||||
Picture | WBPicture0000013095 | ||||||
Remark | Sequence connection from [Kraemer B, Kimble JE, Wickens MP] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |