WormBase Tree Display for Gene: WBGene00003785

WBGene00003785 SMap: S_parent: Sequence: Y53C12B
  Identity: Version: 1
    Name: CGC_name: nos-3 Person_evidence: WBPerson575
      Sequence_name: Y53C12B.3
      Molecular_name (15)
      Other_name: syt-1
        pqn-86
        Nanos Paper_evidence: WBPaper00053101
        CELE_Y53C12B.3 Accession_evidence: NDB BX284602
      Public_name: nos-3
    DB_info: Database: AceView gene 2K39
        WormQTL gene WBGene00003785
        WormFlux gene WBGene00003785
        NDB locus_tag CELE_Y53C12B.3
        NCBI gene 174535
        RefSeq protein NM_001393164.1
            NM_001393165.1
            NM_063700.4
            NM_001395805.1
            NM_063701.5
        TREEFAM TREEFAM_ID TF350042
        TrEMBL UniProtAcc A0A7R9XN27
            O62486
            O18218
            A0A7R9XLP7
            A0A7R9XMZ3
        UniProt_GCRP UniProtAcc A0A7R9XMZ3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nos
    Allele (82)
    Strain: WBStrain00022580
      WBStrain00022615
      WBStrain00054810
    RNASeq_FPKM (74)
    GO_annotation: 00031725
      00031726
      00031727
      00031728
      00031729
      00031730
      00031731
      00037989
    Ortholog (20)
    Structured_description: Concise_description: nos-3 encodes a homolog of Drosophila NANOS that physically interacts with FBF-1 (similar, though not orthologous, to Drosophila PUMILIO); NOS-3 is required in development of the hermaphrodite germ-line to promote the switch from sperm to oocyte production, perhaps by forming a complex with FBF-1 that controls fem-3 mRNA. Paper_evidence: WBPaper00003692
            WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Involved in positive regulation of meiotic nuclear division. Located in cytoplasm. Expressed in several structures, including Psub3; Psub4; Z2; Z3; and germ line. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y53C12B.3a
      Y53C12B.3b
      Y53C12B.3c
      Y53C12B.3d
      Y53C12B.3e
    Corresponding_transcript: Y53C12B.3a.1
      Y53C12B.3b.1
      Y53C12B.3c.1
      Y53C12B.3d.1
      Y53C12B.3e.1
    Other_sequence: CR00137
      CRC05300_1
      CR00136
      MC05328
      CR08429
    Associated_feature (11)
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1202
      Expr1203
      Expr1011795
      Expr1031771
      Expr1160694
      Expr2014358
      Expr2032599
    Drives_construct: WBCnstr00008698
      WBCnstr00008699
      WBCnstr00008700
      WBCnstr00035868
    Construct_product: WBCnstr00005242
      WBCnstr00008698
      WBCnstr00008699
      WBCnstr00008700
      WBCnstr00035868
    Antibody: WBAntibody00000240
    Microarray_results (42)
    Expression_cluster (117)
    Interaction: WBInteraction000000937
      WBInteraction000000938
      WBInteraction000002315
      WBInteraction000002391
      WBInteraction000002392
      WBInteraction000002635
      WBInteraction000004918
      WBInteraction000005783
      WBInteraction000008833
      WBInteraction000009123
      WBInteraction000009153
      WBInteraction000009155
      WBInteraction000028212
      WBInteraction000028263
      WBInteraction000028264
      WBInteraction000028756
      WBInteraction000028829
      WBInteraction000052787
      WBInteraction000052870
      WBInteraction000126788
      WBInteraction000127572
      WBInteraction000137037
      WBInteraction000140886
      WBInteraction000147209
      WBInteraction000150130
      WBInteraction000163331
      WBInteraction000195137
      WBInteraction000215600
      WBInteraction000216700
      WBInteraction000216721
      WBInteraction000221328
      WBInteraction000225047
      WBInteraction000225079
      WBInteraction000225505
      WBInteraction000226640
      WBInteraction000231162
      WBInteraction000231865
      WBInteraction000232994
      WBInteraction000236402
      WBInteraction000239550
      WBInteraction000248136
      WBInteraction000254404
      WBInteraction000265003
      WBInteraction000267872
      WBInteraction000269681
      WBInteraction000271958
      WBInteraction000288536
      WBInteraction000289400
      WBInteraction000291953
      WBInteraction000293405
      WBInteraction000298866
      WBInteraction000300093
      WBInteraction000309283
      WBInteraction000313647
      WBInteraction000315864
      WBInteraction000316580
      WBInteraction000325482
      WBInteraction000331391
      WBInteraction000333744
      WBInteraction000333963
      WBInteraction000337684
      WBInteraction000360429
      WBInteraction000374597
      WBInteraction000379285
      WBInteraction000380586
      WBInteraction000381761
      WBInteraction000383956
      WBInteraction000390801
      WBInteraction000392225
      WBInteraction000392672
      WBInteraction000398222
      WBInteraction000401793
      WBInteraction000403521
      WBInteraction000406476
      WBInteraction000410951
      WBInteraction000415099
      WBInteraction000415199
      WBInteraction000422522
      WBInteraction000425186
      WBInteraction000438621
      WBInteraction000445493
      WBInteraction000451411
      WBInteraction000454643
      WBInteraction000456455
      WBInteraction000460524
      WBInteraction000466207
      WBInteraction000500391
      WBInteraction000500404
      WBInteraction000500405
      WBInteraction000500915
      WBInteraction000500916
      WBInteraction000501636
      WBInteraction000501965
      WBInteraction000503659
      WBInteraction000504883
      WBInteraction000518571
      WBInteraction000521488
      WBInteraction000521567
      WBInteraction000522446
      WBInteraction000541205
      WBInteraction000545928
      WBInteraction000546115
      WBInteraction000548822
      WBInteraction000548823
      WBInteraction000548964
      WBInteraction000549043
      WBInteraction000550490
      WBInteraction000550494
      WBInteraction000550519
      WBInteraction000550528
      WBInteraction000550532
      WBInteraction000550555
      WBInteraction000550618
      WBInteraction000550622
      WBInteraction000551983
      WBInteraction000556387
      WBInteraction000564101
      WBInteraction000574044
      WBInteraction000577364
      WBInteraction000577651
      WBInteraction000582224
      WBInteraction000583054
  Map_info: Map: II Position: 1.70862 Error: 0.00125
    Positive: Positive_clone: Y53C12B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4543
        5522
    Pseudo_map_position
  Reference (65)
  Picture: WBPicture0000013095
  Remark: Sequence connection from [Kraemer B, Kimble JE, Wickens MP]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene