WormBase Tree Display for Gene: WBGene00003758
expand all nodes | collapse all nodes | view schema
| WBGene00003758 | SMap | S_parent | Sequence | F45E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nlp-20 | Person_evidence | WBPerson242 | |||||
| Sequence_name | F45E4.8 | ||||||||
| Molecular_name | F45E4.8 | ||||||||
| F45E4.8.1 | |||||||||
| CE10506 | |||||||||
| Other_name | CELE_F45E4.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nlp-20 | ||||||||
| DB_info | Database | AceView | gene | 4I406 | |||||
| WormQTL | gene | WBGene00003758 | |||||||
| WormFlux | gene | WBGene00003758 | |||||||
| NDB | locus_tag | CELE_F45E4.8 | |||||||
| NCBI | gene | 177542 | |||||||
| RefSeq | protein | NM_068843.7 | |||||||
| TREEFAM | TREEFAM_ID | TF321443 | |||||||
| TrEMBL | UniProtAcc | Q94233 | |||||||
| UniProt_GCRP | UniProtAcc | Q94233 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00032094 | ||||||||
| WBStrain00055188 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00087392 | ||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00003756 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | nlp-20 encodes a predicted neuropeptide of the FAFA family; expressed in pharyngeal neurons. | Paper_evidence | WBPaper00003915 | |||||
| WBPaper00004975 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in neuropeptide signaling pathway. Expressed in head neurons; intestine; pharyngeal neurons; spermatheca; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45E4.8 | |||||||
| Corresponding_transcript | F45E4.8.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf1017747 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015026 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047413 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1713 | ||||||||
| Expr1015695 | |||||||||
| Expr1151255 | |||||||||
| Expr2014285 | |||||||||
| Expr2032525 | |||||||||
| Drives_construct | WBCnstr00010407 | ||||||||
| WBCnstr00035887 | |||||||||
| Construct_product | WBCnstr00016261 | ||||||||
| WBCnstr00035887 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction (106) | |||||||||
| Map_info | Map | IV | Position | 3.37049 | Error | 0.001004 | |||
| Positive | Positive_clone | F45E4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5593 | |||||||
| 5633 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003915 | ||||||||
| WBPaper00004975 | |||||||||
| WBPaper00026655 | |||||||||
| WBPaper00028453 | |||||||||
| WBPaper00030763 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00044753 | |||||||||
| WBPaper00053315 | |||||||||
| WBPaper00055923 | |||||||||
| WBPaper00061409 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
